Parental gene:

RAD23B, ENSPTRG00000021229

Aliases:None
Description:Pan troglodytes RAD23 homolog B (S. cerevisiae) (RAD23B), mRNA. [Source:RefSeq mRNA;Acc:NM_001244709]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:106175073..106218357(+)


>ENSPTRG00000021229
GTGAAAGCACTGAAAGAGAAGATTGAATCTGAAAAGGGAAAAGATGCCTTTCCGGTAGCAGGTCAAAAATTAATTTATGC
AGGCAAAATCCTCAATGATGATACTGCTCTCAAAGAATATAAAATTGATGAGAAAAACTTTGTGGTGGTTATGGTGACCA
AACCCAAAGCAGTGTCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGTTACTTGCTCC
ACCACCACAACTGTGGCTCAGGCTCCAATCCCTGTCCCTGCCTTGGCCCCCACTTCCACACCTGCATCCATCACTCCAGC
ATCAGCGACAGCATCTTCTGAACCTGCACCTGCTAGTGCAGCTAAACAAGAGAAGCCTGCAGAAAAGCCAGCAGAGACAC
CAGTGGCTACTAGCCCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGATGCAACGAGT
GCACTTGTGACAGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGC
AGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGATAGAGAAAGTC
AGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGCAGCAACTACG
ACAGCAACAACTACAACAACAAGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTCAACAGATGAG
ACAAATTATTCAGCAGAATCCTTCCTTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAATTACTTCAGC
AAATTAGCCAACACCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGGAGGAGGAGGT
GGAGGTGGCAGTGGAGGAATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACGCCTCAGGAAAAAGAAGC
TATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCGTATTTTGCTTGTGAGAAGAATGAGAATT
TGGCTGCCAATTTTCTTCTACAGCAGAACTTTGATGAAGATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .45 RPM
SRP007412_cerebellum 64 .78 RPM
SRP007412_heart 55 .41 RPM
SRP007412_kidney 52 .46 RPM
SRP007412_liver 73 .55 RPM
SRP007412_testis 147 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001926 ortholog_one2one 1 retrogene
retro_btau_877,
Callithrix jacchus ENSCJAG00000016908 ortholog_one2many 2 retrogenes
retro_cjac_3865, retro_cjac_4184,
Equus caballus ENSECAG00000021928 ortholog_one2one 1 retrogene
retro_ecab_361,
Homo sapiens ENSG00000119318 ortholog_one2one 2 retrogenes
retro_hsap_2611, retro_hsap_3754,
Gorilla gorilla ENSGGOG00000002511 ortholog_one2one 1 retrogene
retro_ggor_1829,
Macaca mulatta ENSMMUG00000014944 ortholog_one2one 2 retrogenes
retro_mmul_1476, retro_mmul_1725,
Nomascus leucogenys ENSNLEG00000017319 ortholog_one2one 1 retrogene
retro_nleu_1590,
Oryctolagus cuniculus ENSOCUG00000007316 possible_ortholog 1 retrogene
retro_ocun_1429,
Otolemur garnettii ENSOGAG00000014216 ortholog_one2one 1 retrogene
retro_ogar_3040,
Pongo abelii ENSPPYG00000019477 ortholog_one2one 2 retrogenes
retro_pabe_2344, retro_pabe_3162,
Sarcophilus harrisii ENSSHAG00000011925 ortholog_one2many 1 retrogene
retro_shar_248,
Sus scrofa ENSSSCG00000005436 ortholog_one2one 1 retrogene
retro_sscr_770,
Tursiops truncatus ENSTTRG00000007597 ortholog_one2one 1 retrogene
retro_ttru_1401,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1760 85.38 100.00
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Download FASTA sequences of all ENSPTRG00000021229 retrocopies