Parental gene:

BAG1, ENSPTRG00000020856

Aliases:None
Description:BCL2-associated athanogene [Source:HGNC Symbol;Acc:937]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:33656352..33665489(-)


>ENSPTRG00000020856
GCGACCCAGAGTGAGGAGGCGACCCAGGGCGAAGAGATGAATCGGAGCCAGGAGGTGACCCGGGACGAGGAGTCGACCCG
GAGCGAGGAGGTGACCAGGGAGGAAATGGCGGCAGCTGGGCTCACCGTGACTGTCACCCACAGCAATGAGAAGCACGACC
TTCATGTTACCTCCCAGCAGGGCAGCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGTCATAGGGGTT
CCACAGTCTTTTCAGAAACTCATATTTAAGGGAAAATCTCTGAAGGAAATGGAAACACCGTTGTCAGCACTTGGAATACA
AGATGGTTGCCGGGTCATGTTAATTGGGAAAAAGAACAGTCCACAGGAAGAGGTTGAACTAAAGAAGTTGAAACATTTGG
AGAAGTCTGTGGAGAAGATAGCTGACCAGCTGGAAGAGTTGAATAAAGAGCTTACTGGAATCCAGCAGGGTTTTCTGCCC
AAGGATTTGCAAGCTGACGCTCTCTGCAAACTTGATAGGAGAGTAAAAGCCACAATAGAGCAGTTTATGAAGATCTTGGA
GGAGATTGACACACTGATCCTGCCAGAAAATTTCAAAGACAGTAGATTGAAAAGGAAAGGCTTGGTAAAAAAGGTTCAGG
CATTCCTAGCTGAGTGTGACACAGTGGAGCAGAACATCTGCCAGGAGACCGAGCGGCTGCAGTCTACAAACTTTGCCCTG
GCCGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 33 .53 RPM
SRP007412_cerebellum 44 .49 RPM
SRP007412_heart 35 .47 RPM
SRP007412_kidney 46 .84 RPM
SRP007412_liver 43 .01 RPM
SRP007412_testis 210 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017845 ortholog_one2one 1 retrogene
retro_btau_901,
Choloepus hoffmanni ENSCHOG00000012656 ortholog_one2one 1 retrogene
retro_chof_2328,
Callithrix jacchus ENSCJAG00000008074 ortholog_one2one 1 retrogene
retro_cjac_4052,
Equus caballus ENSECAG00000017942 ortholog_one2one 1 retrogene
retro_ecab_267,
Homo sapiens ENSG00000107262 ortholog_one2one 1 retrogene
retro_hsap_4673,
Gorilla gorilla ENSGGOG00000016534 ortholog_one2one 1 retrogene
retro_ggor_2899,
Macaca mulatta ENSMMUG00000020148 ortholog_one2one 1 retrogene
retro_mmul_2487,
Nomascus leucogenys ENSNLEG00000005204 ortholog_one2one 1 retrogene
retro_nleu_2165,
Oryctolagus cuniculus ENSOCUG00000008945 ortholog_one2many 1 retrogene
retro_ocun_481,
Pongo abelii ENSPPYG00000019138 ortholog_one2one 1 retrogene
retro_pabe_3630,
Tursiops truncatus ENSTTRG00000010573 ortholog_one2one 2 retrogenes
retro_ttru_252, retro_ttru_946,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3105 78.95 54.96
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Download FASTA sequences of all ENSPTRG00000020856 retrocopies