Parental gene:

ENSOCUG00000008945

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:20183658..20195995(+)


>ENSOCUG00000008945
AATGCAGTCAGTCAGGCTGGGCGGCGGAGCCTTGGGTTTCGCTTTCCCGAAGAATCGGTTCATCTTGGGCGGCAGCGAAG
AACCCCAAACACTGGAGCCAAACCAGAGACGTCGGAGCCCCTGGCCGAGGGCTGCCAGCCAGCTTCTCAGCGCCCATCCC
TCCGGAGAGCAGCCGGGGGGCATGACCGACCCACCAGGGGCGCCGCCGCCGGCGCTCGCAGGCCGCGGGTGAAGAAGAAA
GTCCGTACCCGCTCGGCCCGGAGCGAGGAGGCGCCGCGAGACGAGGAGGCGCCCCAGATCGAGGAGGCGCCCCCGGCCGA
GGAGGTGACCCCAGACGAGGTGATCCAGGCGGAGGAGGTGACCGAGACCGAGGAAATGGCGGCAGCCGGGCTCAGCGTGA
CCGTCACCCACAGCAATGAGAAGCATGACCTTCATGTCACCCCTCAGCAGGGCAGCAGCGAACCAATTGTCCAAGACCTG
GCCCAGGTTGTTGAAGAGGCCATAGGGGTTCCACTGCCTTTCCAGAAACTCATATTTAAGGGAAAATCTCTGAAGGAAAT
GGAGACACCATTGTCAGCACTTGGAATACAAAACGGTTGCCGGGTCATGTTAATTGGGGAAAAGAACTGTCCAGAGGAAG
AGGTTGAACTAAAGAAGTTGAAGGATTTGGAGAAGTCTGTGGAGAAGATAGCCAGCCAACTAGAAGAGTTGAATAAAGAA
CTCAGTGGAATCCAACAGGGTTTTCTGGCCAAGGATTTGCAAGCTGAAGCTCTCAGCAAACTTGATAGGAGAGTAAAAGC
CACAATTGAGCATTTTATGAAGATTTTGGAGGAGATTGACACCCTGATCCTACCAGAAAATTTCAAAGACAGTAGACTGA
AAAGGAAGGGTTTGGTGAAGAAGATCCAGGCGTTCCTAGCTGAGTGCGACACAGTGGAGCAGAACATCTGCCAGGAGACT
GAGAGGCTCCAGTCTACAAACTTGGCCTTGGCTGAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 45 .31 RPM
SRP017611_kidney 61 .02 RPM
SRP017611_liver 11 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017845 ortholog_one2many 1 retrogene
retro_btau_901,
Choloepus hoffmanni ENSCHOG00000012656 ortholog_one2many 1 retrogene
retro_chof_2328,
Callithrix jacchus ENSCJAG00000008074 ortholog_one2many 1 retrogene
retro_cjac_4052,
Equus caballus ENSECAG00000017942 ortholog_one2many 1 retrogene
retro_ecab_267,
Homo sapiens ENSG00000107262 ortholog_one2many 1 retrogene
retro_hsap_4673,
Gorilla gorilla ENSGGOG00000016534 ortholog_one2many 1 retrogene
retro_ggor_2899,
Macaca mulatta ENSMMUG00000020148 ortholog_one2many 1 retrogene
retro_mmul_2487,
Nomascus leucogenys ENSNLEG00000005204 ortholog_one2many 1 retrogene
retro_nleu_2165,
Pongo abelii ENSPPYG00000019138 ortholog_one2many 1 retrogene
retro_pabe_3630,
Pan troglodytes ENSPTRG00000020856 ortholog_one2many 1 retrogene
retro_ptro_3105,
Tursiops truncatus ENSTTRG00000010573 ortholog_one2many 2 retrogenes
retro_ttru_252, retro_ttru_946,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_481 98.17 65.96
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Download FASTA sequences of all ENSOCUG00000008945 retrocopies