Parental gene:

EIF4E2, ENSPTRG00000013043

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:237773260..237791613(+)


>ENSPTRG00000013043
ATGAACAACAAGTTCGACGCTTTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAACGGAACGAGACAAGAATCAGAGCAGTAGCAAGAGAAAGGCTGTTGTCCCTGGACCGGCAGAGC
ATCCCCTGCAGTACAACTACACTTTTTGGTACTCCAGGAGAACCCCCGGCCGTCCCACGAGCTCACAGAGCTATGAACAG
AATATCAAACAGATTGGCACCTTTGCCTCTGTGGAGCAGTTCTGGAGGTTTTATAGCCACATGGTACGTCCTGGGGACCT
GACAGGCCACAGTGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGTGGCA
AGTGGATTATTCGGCTGCGGAAGGGCTTGGCCTCCCGTTGCTGGGAGAATCTCATTTTGGCCATGCTGGGGGAACAGTTC
ATGGTTGGGGAGGAGATCTGTGGGGCTGTGGTGTCTGTCCGCTTTCAGGAGGACATTATTTCAATATGGAATAAGACTGC
CAGTGACCAAGCAACCACAGCCCGAATCCGGGACACACTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACTCACACCGACAGCATCAAAATGCCAGGCAGGCTGGGCCCCCAAAGGCTCCTTTTTCAAAACCTCTGGAAGCCG
CGGTTGAATGTGCCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .49 RPM
SRP007412_cerebellum 22 .55 RPM
SRP007412_heart 19 .00 RPM
SRP007412_kidney 22 .91 RPM
SRP007412_liver 39 .84 RPM
SRP007412_testis 52 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016456 ortholog_one2one 1 retrogene
retro_amel_1304,
Canis familiaris ENSCAFG00000011328 possible_ortholog 1 retrogene
retro_cfam_183,
Callithrix jacchus ENSCJAG00000013786 ortholog_one2one 2 retrogenes
retro_cjac_1061, retro_cjac_2717,
Equus caballus ENSECAG00000020187 ortholog_one2one 2 retrogenes
retro_ecab_300, retro_ecab_847,
Erinaceus europaeus ENSEEUG00000015153 ortholog_one2one 2 retrogenes
retro_eeur_57, retro_eeur_668,
Homo sapiens ENSG00000135930 ortholog_one2one 1 retrogene
retro_hsap_2689,
Microcebus murinus ENSMICG00000015082 possible_ortholog 2 retrogenes
retro_mmur_806, retro_mmur_975,
Myotis lucifugus ENSMLUG00000011269 ortholog_one2many 1 retrogene
retro_mluc_60,
Mustela putorius furo ENSMPUG00000005206 ortholog_one2one 2 retrogenes
retro_mputfur_110, retro_mputfur_1554,
Nomascus leucogenys ENSNLEG00000014333 ortholog_one2one 1 retrogene
retro_nleu_1189,
Pan troglodytes ENSPTRG00000016301 within_species_paralog 4 retrogenes
retro_ptro_1159, retro_ptro_1386, retro_ptro_1957, retro_ptro_2672,
Sarcophilus harrisii ENSSHAG00000013108 ortholog_one2one 1 retrogene
retro_shar_101,
Tupaia belangeri ENSTBEG00000004455 ortholog_one2one 11 retrogenes
retro_tbel_1299, retro_tbel_2197, retro_tbel_2623, retro_tbel_2680, retro_tbel_3932, retro_tbel_4471, retro_tbel_4622, retro_tbel_536, retro_tbel_616, retro_tbel_650, retro_tbel_714,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1816 83.00 100.00
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Download FASTA sequences of all ENSPTRG00000013043 retrocopies