Parental gene:

CDCA7, ENSPTRG00000012645

Aliases:None
Description:cell division cycle associated 7 [Source:HGNC Symbol;Acc:14628]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:177812425..177822617(+)


>ENSPTRG00000012645
CAGAAAGATCTCAGAGTAAAGAAGAACTTAAAGAAATTCAGATATGTGAAGTTGATTTCCATGGAAACCTCGTCATCCTC
TGATGACAGTTGTGACAGCTTTGCTTCTGATAATTTTGCAAACACGAAACCTAAATTCAGGTCAGATATCAGTGAAGAAC
TGGCAAATGTTTTTTATGAGGACTCTGATAATGAATCTTTCTGCGGCTTTTCAGAAAGTGAGGTGCAAGATGTATTAGAC
CATTGTGGATTTTTACAGAAACCAAGGCCAGATGTCACTAACGAACTGGCCGGTATTTTTCATGCCGACTCTGACGATGA
ATCATTTTGCGGTTTCTCAGAGAGTGAGATACAAGATGGAATGAGGCTGCAGTCAGTTCGGGAAGGCTGTAGGACCCGCA
GCCAGTGCAGGCACTCTGGACCTCTCAGGGTGGCGATGAAGTTTCCAGCGCGAAGTACCAGGGGAGCAACCAACAAAAAA
GCAGAGTCCCCCCAGCCCTCAGAGAATTCTGTGACTGATTCCAACTCCGATTCAGAAGATGAAAGTGGAATGAATTTTTT
GGAGAAAAGGGCTTTAAATATAAAGCAGAACAAAGCAATGCTTGCAAAACTCATGTCTGAATTAGAAAGCTTCCCTGGCT
CGTTCCGTGGAAGACATCCCCTCCCAGGCTCCGACTCACAATCAAGGAGACCGCGAAGGCGTACATTCCCGGGTGTTGCT
TCCAGGAGAAACCCTGAACGGAGAGCTCGTCCTCTTACCAGGTCAAGGTCCCGGATCCTCGGGTCCCTTGATGCTCTACC
CATGGAGGAGGAGGAGGAAGAGGATAAGTACATGTTGGTGAGAAAGAGGAAGACCATGGATGGCTACATGAATGAAGATG
ACCTGCCCAGAAGCCGTCGCTCCAGATCATCCGTGACCCTTCCGCATATAATTCGCCCAGTGGAAGAAATTACAGAGGAA
GAGTTGGAGAACGTCTGCAGCAATTCTCGAGAGAAGATATATAACCGTTCACTGGGCTCTACTTGTCATCAGTGCCGTCA
GAAGACTATTGATACCAAAACAAACTGCAGAAACCCAGACTGCTGGGGCGTTCGAGGCCAGTTCTGTGGCCCCTGCCTTC
GAAACCGTTATGGTGAAGAGGTCAGGGATGCTCTGCTGGATCCGAACTGGCATTGCCCGCCTTGTCGAGGAATCTGCAAC
TGCAGTTTCTGCCGGCAGCGAGATGGACGGTGTGCGACTGGGGTCCTTGTGTATTTAGCCAAATATCATGGCTTTGGGAA
TGTGCATGCCTACTTGAAAAGCCTGAAACAGGAATTTGAAATGCAAGCATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .20 RPM
SRP007412_cerebellum 0 .36 RPM
SRP007412_heart 0 .26 RPM
SRP007412_kidney 0 .13 RPM
SRP007412_liver 0 .23 RPM
SRP007412_testis 14 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007809 ortholog_one2one 1 retrogene
retro_cjac_4087,
Cavia porcellus ENSCPOG00000011784 ortholog_one2many 2 retrogenes
retro_cpor_661, retro_cpor_691,
Homo sapiens ENSG00000144354 ortholog_one2one 1 retrogene
retro_hsap_3438,
Mus musculus ENSMUSG00000055612 ortholog_one2one 2 retrogenes
retro_mmus_1493, retro_mmus_1494,
Nomascus leucogenys ENSNLEG00000005787 ortholog_one2one 1 retrogene
retro_nleu_2295,
Ictidomys tridecemlineatus ENSSTOG00000009026 ortholog_one2one 1 retrogene
retro_itri_369,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2331 71.26 57.56
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Download FASTA sequences of all ENSPTRG00000012645 retrocopies