Parental gene:

PCGF1, ENSPTRG00000012094

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:75469767..75473306(-)


>ENSPTRG00000012094
ATGGCGTCTCCTCAGGGGGGCCAGATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCC
GCTACGGAACGAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT
TCGTGGATGCCACCACCATCACAGAGTGTCTTCATACTTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAG
TACTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACAT
CGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAAGAGAAACGGATTCGGGAATTCTACCAGTCCCGAGGTTTGGACC
GGGTCACCCAGCCCACTGGGGAAGAGCCAGCACTGAGCAACCTCGGCCTCCCCTTCAGCAGCTTTGACCACTCTAAAGCC
CACTACTATCGCTATGATGAGCAGCTGAACCTGTGCCTGGAGCGGCTGAGTTCTGGCAAAGACAAGAATAAAAGCGTCCT
GCAGAACAAGTATGTCCGATGTTCTGTTAGAGCTGAGGTACGCCATCTCCGGAGGGTCCTGTGTCACCGCTTGATGCTAA
ACCCTCAGCATGTGCAGCTCCTTTTTGACAATGAAGTTCTCCCTGATCACATGACAATGAAGCAGATATGGCTCTCCCGC
TGGTTCGGCAAGCCATCCCCTTTGCTTTTACAATACAGTGTGAAAGAGAAGAGGAGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .85 RPM
SRP007412_cerebellum 10 .65 RPM
SRP007412_heart 5 .45 RPM
SRP007412_kidney 10 .96 RPM
SRP007412_liver 10 .28 RPM
SRP007412_testis 17 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000115289 ortholog_one2one 1 retrogene
retro_hsap_1029,
Mus musculus ENSMUSG00000069678 ortholog_one2one 1 retrogene
retro_mmus_2722,
Nomascus leucogenys ENSNLEG00000000752 ortholog_one2one 1 retrogene
retro_nleu_907,
Pongo abelii ENSPPYG00000012270 ortholog_one2one 1 retrogene
retro_pabe_862,
Pan troglodytes ENSPTRG00000009074 within_species_paralog 1 retrogene
retro_ptro_11,
Sorex araneus ENSSARG00000007319 ortholog_one2one 1 retrogene
retro_sara_448,
Sus scrofa ENSSSCG00000008277 ortholog_one2many 1 retrogene
retro_sscr_1069,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_704 83.33 50.58
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Download FASTA sequences of all ENSPTRG00000012094 retrocopies