Parental gene:

Pcgf1, ENSMUSG00000069678

Aliases:Pcgf1, 2010002K04Rik, AU024121, Nspc1
Description:polycomb group ring finger 1 [Source:MGI Symbol;Acc:MGI:1917087]
Organism:Mouse (Mus musculus)
Coordinates:6:83077868..83080855(+)


>ENSMUSG00000069678
ATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCCACTACGGAACGAGGAGGAGGTCCGGGTGAAGATCAA
AGACCTGAATGAACACATCGTTTGCTGCCTGTGCGCGGGCTACTTCGTGGATGCCACCACCATCACAGAGTGTCTCCACA
CCTTCTGCAAAAGTTGTATCGTGAAGTACCTGCAAACCAGCAAGTACTGCCCCATGTGCAACATCAAGATCCACGAGACG
CAGCCGTTGCTCAATCTCAAACTGGATCGGGTCATGCAGGACATAGTGTATAAGCTAGTGCCAGGCTTGCAAGACAGTGA
AGAGAAACGGATTCGGGAATTCTATCAGTCCCGAGGCTTAGACAGAGTCTCCCAGCCCAGTGGTGAAGAGCCAGCCCTGA
GCAACCTTGGCCTCCCCTTCAGCAGTTTTGACCACTCTAAAGCCCACTATTATCGATATGATGAACAGCTGAGCCTATGC
CTGGAGCGGCTGAGTTCTGGCAAAGACAAGAATAAAAATGTCCTTCAGAACAAGTATGTTCGGTGTTCTGTGAGAGCTGA
GGTCCGCCATCTCCGAAGGGTTCTGTGTCACCGACTAATGCTAAATCCACAGCATGTACAGCTCCTTTTTGACAATGAGG
TTCTCCCAGATCACATGACAATGAAACAGCTATGGCTGTCCCGCTGGTTCGGCAAGCCATCTCCTTTGCTTCTCCAATAC
AGTGTGAAAGAGAAGAGGAGGTAG

Library Parental gene expression (RPM)
SRP007412_brain 6 .17 RPM
SRP007412_cerebellum 8 .16 RPM
SRP007412_heart 3 .86 RPM
SRP007412_kidney 4 .43 RPM
SRP007412_liver 3 .11 RPM
SRP007412_testis 14 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000115289 ortholog_one2one 1 retrogene
retro_hsap_1029,
Mus musculus ENSMUSG00000026739 within_species_paralog 1 retrogene
retro_mmus_3710,
Nomascus leucogenys ENSNLEG00000000752 ortholog_one2one 1 retrogene
retro_nleu_907,
Pongo abelii ENSPPYG00000012270 ortholog_one2one 1 retrogene
retro_pabe_862,
Pan troglodytes ENSPTRG00000012094 ortholog_one2one 1 retrogene
retro_ptro_704,
Sorex araneus ENSSARG00000007319 ortholog_one2one 1 retrogene
retro_sara_448,
Sus scrofa ENSSSCG00000008277 ortholog_one2many 1 retrogene
retro_sscr_1069,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2722 96.48 76.83
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000069678 retrocopies