Parental gene:

RNASEH1, ENSPTRG00000011614

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:3057694..3071903(-)


>ENSPTRG00000011614
ATGAGCTGGCTTCTGTTCCTGGCCCACAGAGTCGCCTTGGCCGCCTTCCCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCATGAAAATCAACATGGACAAGAATCGGAGGCAAAAGCCAGCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
ACATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCAAGCGTGGAGCCGGCGCCTCCAGTTAGCAGAGACACGTTTT
CCTACATGGGAGACTTCGTCGTGGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATC
GGCGTTTACTGGGGGCCGGGCCATCCTTTAAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTA
CGATAAATGGTATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAAGAGGACTTTGTGGCACTGGAGAGGCTTACCCAGGGGATGGACATTCAGTGGATGCATGTTCCTGGTCATTCGGGATT
TATAGGCAATGAAGAAGCTGACAGATTAGCCAGAGAAGGAGCTAAACAATCGGAAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .49 RPM
SRP007412_cerebellum 20 .40 RPM
SRP007412_heart 14 .51 RPM
SRP007412_kidney 9 .62 RPM
SRP007412_liver 11 .69 RPM
SRP007412_testis 11 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008547 ortholog_one2one 6 retrogenes
retro_chof_158, retro_chof_1653, retro_chof_1836, retro_chof_2224, retro_chof_485, retro_chof_843,
Callithrix jacchus ENSCJAG00000035450 ortholog_one2one 1 retrogene
retro_cjac_3811,
Echinops telfairi ENSETEG00000012674 ortholog_one2one 1 retrogene
retro_etel_1286,
Homo sapiens ENSG00000171865 ortholog_one2one 2 retrogenes
retro_hsap_1814, retro_hsap_300,
Macropus eugenii ENSMEUG00000003610 ortholog_one2one 1 retrogene
retro_meug_1172,
Macaca mulatta ENSMMUG00000014475 ortholog_one2one 2 retrogenes
retro_mmul_544, retro_mmul_799,
Monodelphis domestica ENSMODG00000014491 ortholog_one2many 1 retrogene
retro_mdom_593,
Nomascus leucogenys ENSNLEG00000015400 ortholog_one2one 2 retrogenes
retro_nleu_2399, retro_nleu_2959,
Pongo abelii ENSPPYG00000025873 ortholog_one2one 1 retrogene
retro_pabe_18,
Pteropus vampyrus ENSPVAG00000002070 ortholog_one2one 1 retrogene
retro_pvam_144,
Sarcophilus harrisii ENSSHAG00000013051 ortholog_one2one 1 retrogene
retro_shar_245,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_244 73.14 98.60
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Download FASTA sequences of all ENSPTRG00000011614 retrocopies