Parental gene:

RNASEH1, ENSMMUG00000014475

Aliases:None
Description:ribonuclease H1 precursor [Source:RefSeq peptide;Acc:NP_001244787]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:3044746..3061359(-)


>ENSMMUG00000014475
ATGAGCTGGCTTGTGTTCCTGGCCCACAGAGTCGCCTTGGCCGCCGTGTCCTGCCGTTGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAAAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGACCTTTGTCAGGAAATCTGCAAGCCCAGAAGTTTCA
GAAGGGCAGGAAAATCAACATGGACAAGAATTGCAAATGAAAGCCAGCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
AGATGAAAGCGCAGAGCCGTATGCAAAGCACATGAAGCCGAGCATGGAGCCGGCGCCTCCAGTTAGCAGAGACACGTTTT
CCTACATGGGAGACTTTGTTGTCGTCTACACTGATGGCTGCTGCTCCAGTAATGGGCGTAGAAGGCCACGAGCGGGAATC
GGCGTTTACTGGGGGCCGGGCCATCCTTTAAATGTGGGCATTAGACTTCCTGGGCGACAGACAAACCAAAGAGCAGAAAT
TCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGGCTCAAAACATCAGTAAACTGGTTCTGTATACAGACAGTATGTTTA
CTATAAACGGTATAACTAACTGGGTTCAAAGTTGGAAGGAAAATGGGTGGAAGACAAGTGCAGGGAAAGAGGTGATCAAC
AAGGAGGACTTCGTGGCACTGGAGAGGCTCACCCAGGGGATGGACATTCAGTGGATGCACGTTCCTGGTCATTCGGGATT
TATAGGCAATGAAGAAGCTGATAGATTAGCCAGAAAAGGAGCTAAACAATTGGAAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 12 .89 RPM
SRP007412_brain_prefrontal_cortex 14 .76 RPM
SRP007412_cerebellum 13 .95 RPM
SRP007412_heart 18 .37 RPM
SRP007412_kidney 12 .56 RPM
SRP007412_liver 8 .27 RPM
SRP007412_testis 26 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008547 ortholog_one2one 6 retrogenes
retro_chof_158, retro_chof_1653, retro_chof_1836, retro_chof_2224, retro_chof_485, retro_chof_843,
Callithrix jacchus ENSCJAG00000035450 ortholog_one2one 1 retrogene
retro_cjac_3811,
Echinops telfairi ENSETEG00000012674 ortholog_one2one 1 retrogene
retro_etel_1286,
Homo sapiens ENSG00000171865 ortholog_one2one 2 retrogenes
retro_hsap_1814, retro_hsap_300,
Gorilla gorilla ENSGGOG00000034822 ortholog_one2one 2 retrogenes
retro_ggor_2175, retro_ggor_336,
Macropus eugenii ENSMEUG00000003610 ortholog_one2one 1 retrogene
retro_meug_1172,
Monodelphis domestica ENSMODG00000014491 ortholog_one2many 1 retrogene
retro_mdom_593,
Nomascus leucogenys ENSNLEG00000015400 ortholog_one2one 2 retrogenes
retro_nleu_2399, retro_nleu_2959,
Pongo abelii ENSPPYG00000025873 ortholog_one2many 1 retrogene
retro_pabe_18,
Pan troglodytes ENSPTRG00000011614 ortholog_one2one 1 retrogene
retro_ptro_244,
Pteropus vampyrus ENSPVAG00000002070 ortholog_one2one 1 retrogene
retro_pvam_144,
Sarcophilus harrisii ENSSHAG00000013051 ortholog_one2one 1 retrogene
retro_shar_245,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_544 67.62 97.90
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2. retro_mmul_799 88.15 100.00
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Download FASTA sequences of all ENSMMUG00000014475 retrocopies