Parental gene:

RNASEH1, ENSPPYG00000025873

Aliases:None
Description:ribonuclease H1 [Source:HGNC Symbol;Acc:18466]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:109281881..109326922(+)


>ENSPPYG00000025873
ATGAGCTGGCTTCTGTTCCTGGCCCACAGAGTCGTCTTGGCCGCCGTGTCCTGCCGCCGCGGCTCTCGCGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAGAGCACAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTCGTCAGGAAATCTGCAAGCCCGGAAGTTTCA
GAAGGGCAGGAAAATCAACATGGACAAGAATCGGAGACGAAAGCCAGCAAGCGACTCCGTGAGCCACTGGATGGAGATGG
AGATGAAAGCACAGAGCCGTATGCAAAGCACATGAAGCCGAGCGTGGAGCCGGTGCCTCCAGTTAGCAGAGACACGTTTT
CCTACATGAATGTAGGCATTAGACTTCCTGGGCGGCAGACAAACCAAAGAGCAGAAATTCATGCAGCCTGCAAAGCCATT
GAACAAGCAAAGACTCAAAACATCAATAAACTGGTTCTGTATACAGACAGTATGTTTACGATAAATGGTATAACTAACTG
GGTTCAAGGCTGGAAGAAAAATGGGTGGAAGACAAGTGCAGGGAAGGAGGTGATCAACAAAGAGGACTTCGTGGCACTGG
AGAGGCTTACCCAGGGGATGGACATTCAGTGGATGCATGTTCCTGGTCATTCGGGATTTATAGGCAACGAAGAAGCTGAC
AGATTAGCCAGAGAAGGAGCCAAACAATCGGAAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 7 .57 RPM
SRP007412_cerebellum 4 .74 RPM
SRP007412_heart 4 .88 RPM
SRP007412_kidney 8 .75 RPM
SRP007412_liver 5 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008547 ortholog_one2many 6 retrogenes
retro_chof_158, retro_chof_1653, retro_chof_1836, retro_chof_2224, retro_chof_485, retro_chof_843,
Callithrix jacchus ENSCJAG00000035450 ortholog_one2many 1 retrogene
retro_cjac_3811,
Echinops telfairi ENSETEG00000012674 ortholog_one2many 1 retrogene
retro_etel_1286,
Homo sapiens ENSG00000171865 ortholog_one2one 2 retrogenes
retro_hsap_1814, retro_hsap_300,
Gorilla gorilla ENSGGOG00000034822 possible_ortholog 2 retrogenes
retro_ggor_2175, retro_ggor_336,
Macropus eugenii ENSMEUG00000003610 ortholog_one2many 1 retrogene
retro_meug_1172,
Macaca mulatta ENSMMUG00000014475 ortholog_one2many 2 retrogenes
retro_mmul_544, retro_mmul_799,
Monodelphis domestica ENSMODG00000014491 ortholog_many2many 1 retrogene
retro_mdom_593,
Nomascus leucogenys ENSNLEG00000015400 ortholog_one2many 2 retrogenes
retro_nleu_2399, retro_nleu_2959,
Pan troglodytes ENSPTRG00000011614 ortholog_one2one 1 retrogene
retro_ptro_244,
Pteropus vampyrus ENSPVAG00000002070 ortholog_one2many 1 retrogene
retro_pvam_144,
Sarcophilus harrisii ENSSHAG00000013051 ortholog_one2many 1 retrogene
retro_shar_245,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_18 90.44 53.97
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Download FASTA sequences of all ENSPPYG00000025873 retrocopies