Parental gene:

NDUFB1, ENSPTRG00000006649

Aliases:None
Description:Pan troglodytes NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa (NDUFB1), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001076782]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:14:91666435..91672423(-)


>ENSPTRG00000006649
ATGATTTGCTGGCGTCACCCCTCTGCTCCGTGCGGGCGCGGCGAATGGCAGGTCCCGAGGTCGCAGCTTCCACTGGCGCG
GGTTGAGTTCCCTGTTGCCCTTGGTCTCGGGGTCGCTGTCGGCGCTGAGGCTGCAGCTATCATGGTGAACTTACTTCAGA
TTGTGCGGGACCACTGGGTTCATGTTCTTGTCCCTATGGGATTTGTCATTGGATGTTATTTAGACAGAAAGAGTGATGAA
CGGCTAACTGCCTTCCGGAACAAGAGTATGTTATTTAAAAGGGAATTGCAACCCAGTGAAGAAGTTACCTGGAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 35 .30 RPM
SRP007412_cerebellum 18 .53 RPM
SRP007412_heart 80 .85 RPM
SRP007412_kidney 56 .72 RPM
SRP007412_liver 32 .64 RPM
SRP007412_testis 10 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014837 ortholog_one2one 1 retrogene
retro_amel_1060,
Callithrix jacchus ENSCJAG00000018067 ortholog_one2one 5 retrogenes
retro_cjac_1027, retro_cjac_1053, retro_cjac_1330, retro_cjac_2586, retro_cjac_3294,
Homo sapiens ENSG00000183648 ortholog_one2one 2 retrogenes
retro_hsap_2646, retro_hsap_311,
Macaca mulatta ENSMMUG00000022428 ortholog_one2one 2 retrogenes
retro_mmul_1520, retro_mmul_538,
Nomascus leucogenys ENSNLEG00000017129 ortholog_one2one 1 retrogene
retro_nleu_652,
Ochotona princeps ENSOPRG00000012731 ortholog_one2one 2 retrogenes
retro_opri_22, retro_opri_992,
Pongo abelii ENSPPYG00000006076 ortholog_one2one 1 retrogene
retro_pabe_2325,
Pteropus vampyrus ENSPVAG00000015319 ortholog_one2one 1 retrogene
retro_pvam_642,
Tursiops truncatus ENSTTRG00000008130 ortholog_one2one 2 retrogenes
retro_ttru_1515, retro_ttru_830,
Vicugna pacos ENSVPAG00000003502 ortholog_one2one 2 retrogenes
retro_vpac_257, retro_vpac_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_253 57.69 73.33
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2. retro_ptro_1782 90.91 73.33
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Download FASTA sequences of all ENSPTRG00000006649 retrocopies