Parental gene:

RBMS2, ENSPTRG00000005104

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:32758063..32828539(-)


>ENSPTRG00000005104
ATGCTGCTATCCGTGACTTCCAGGCCCGGGATTTCGACTTTTGGCTACAATAGAAACAACAAGAAGCCATATGTGTCACT
GGCTCAGCAGATGGCACCACCTAGCCCAAGCAACAGTACACCTAACAGCAGTAGTGGAAGCAATGGAAATGACCAGCTGA
GCAAAACCAACCTATACATCCGAGGATTGCAGCCAGGCACTACTGACCAAGATCTTGTCAAGCTGTGTCAGCCATATGGC
AAGATTGTTTCCACTAAGGCCATACTGGACAAGACCACAAACAAATGTAAAGGCTATGGCTTTGTAGATTTTGACAGCCC
TTCAGCAGCACAGAAAGCTGTAACAGCACTGAAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAACAGGAACAGGACC
CCACAAATTTATACATCTCAAACCTCCCACTCTCAATGGATGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAG
GTTATCTCCACCCGTATCCTTCGAGATACCAGTGGGACCAGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACAGAGAA
GTGTGAAGCCATCATCACCCACTTTAATGGAAAATATATTAAGACACCCCCTGGAGTACCAGCCCCATCCGATCCCTTGC
TTTGCAAATTTGCTGATGGCGGGCCAAAGAAACGACAGAACCAAGGAAAATTTGTGCAAAATGGACGGGCTTGGCCAAGG
AATGGAGACATGGGCGTCATGGCCTTGACCTATGACCCCACCACAGCTCTTCAGAATGGGTTTTACCCAGCCCCTTATAA
CATCACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCCCCATACCTTTCCTCTCCTGTGTCTTCGTATCAGAGAGTGA
CTCAGACATCTCCTCTACAAGTACCTAACCCATCCTGGATGCACCACCATTCATACCTCATGCAGCCTTCAGGTTCAGTT
CTGACACCAGGGATGGACCATCCCATTTCTCTCCAGCCTGCCTCCATGATGGGACCCCTTACCCAGCAACTGGGCCATCT
CTCCCTCAGCAGCACAGGCACGTATATGCCGACGGCTGCAGCTATGCAAGGAGCTTACATCTCCCAGTACACCCCTGTGC
CTTCTTCCAGTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACCAAGTGGCAGTGGACGCACCCTCAGAGCATGGGGTC
TATTCTTTCCAGTTCAACAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .11 RPM
SRP007412_cerebellum 2 .94 RPM
SRP007412_heart 9 .44 RPM
SRP007412_kidney 6 .15 RPM
SRP007412_liver 1 .51 RPM
SRP007412_testis 3 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004054 ortholog_one2one 1 retrogene
retro_amel_454,
Callithrix jacchus ENSCJAG00000010803 ortholog_one2one 1 retrogene
retro_cjac_1022,
Homo sapiens ENSG00000076067 ortholog_one2one 1 retrogene
retro_hsap_1143,
Myotis lucifugus ENSMLUG00000000530 ortholog_one2one 1 retrogene
retro_mluc_1093,
Mus musculus ENSMUSG00000040043 ortholog_one2one 1 retrogene
retro_mmus_1530,
Pan troglodytes ENSPTRG00000000573 other_paralog 3 retrogenes
retro_ptro_101, retro_ptro_2093, retro_ptro_8,
Pan troglodytes ENSPTRG00000014709 within_species_paralog 1 retrogene
retro_ptro_16,
Pteropus vampyrus ENSPVAG00000007616 ortholog_one2one 2 retrogenes
retro_pvam_1429, retro_pvam_695,
Rattus norvegicus ENSRNOG00000003076 ortholog_one2one 1 retrogene
retro_rnor_1374,
Sus scrofa ENSSSCG00000000402 ortholog_one2one 1 retrogene
retro_sscr_546,
Tursiops truncatus ENSTTRG00000002117 ortholog_one2one 1 retrogene
retro_ttru_715,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_778 97.62 92.87
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Download FASTA sequences of all ENSPTRG00000005104 retrocopies