Parental gene:

RPS24, ENSPTRG00000002666

Aliases:None
Description:ribosomal protein S24 [Source:HGNC Symbol;Acc:10411]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:76653176..76657383(+)


>ENSPTRG00000002666
ATGAACGACACTGTAACTATCCGCACTAGAAAGTTCATGACCAACCGACTCCTTCAGAGGAAACAAATGGTCATTGATGT
CCTTCACCCCGGGAAGGCAACAGTGCCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTACAAGACCACACCGGATG
TCATCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCCTGGAT
TATGCAAAGAAAAATGAACCCAAACATAGACTTGCAAGACATGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAGCAACG
AAAGGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAAGCAGAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 165 .41 RPM
SRP007412_cerebellum 121 .81 RPM
SRP007412_heart 107 .14 RPM
SRP007412_kidney 169 .33 RPM
SRP007412_liver 135 .09 RPM
SRP007412_testis 76 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013264 ortholog_one2one 9 retrogenes
retro_btau_1137, retro_btau_1311, retro_btau_1562, retro_btau_285, retro_btau_467, retro_btau_577, retro_btau_586, retro_btau_788, retro_btau_980,
Felis catus ENSFCAG00000000849 possible_ortholog 3 retrogenes
retro_fcat_19, retro_fcat_772, retro_fcat_85,
Homo sapiens ENSG00000138326 ortholog_one2one 3 retrogenes
retro_hsap_1511, retro_hsap_526, retro_hsap_658,
Gadus morhua ENSGMOG00000012595 ortholog_one2many 1 retrogene
retro_gmor_15,
Loxodonta africana ENSLAFG00000027878 possible_ortholog 10 retrogenes
retro_lafr_1017, retro_lafr_190, retro_lafr_303, retro_lafr_340, retro_lafr_439, retro_lafr_558, retro_lafr_596, retro_lafr_669, retro_lafr_854, retro_lafr_995,
Myotis lucifugus ENSMLUG00000024102 ortholog_one2many 1 retrogene
retro_mluc_260,
Mustela putorius furo ENSMPUG00000003778 possible_ortholog 1 retrogene
retro_mputfur_10,
Oryctolagus cuniculus ENSOCUG00000012472 ortholog_one2one 1 retrogene
retro_ocun_16,
Otolemur garnettii ENSOGAG00000011005 possible_ortholog 3 retrogenes
retro_ogar_1000, retro_ogar_2, retro_ogar_2130,
Ictidomys tridecemlineatus ENSSTOG00000013000 ortholog_one2one 4 retrogenes
retro_itri_167, retro_itri_376, retro_itri_528, retro_itri_728,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_362 75.20 93.18
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2. retro_ptro_393 75.56 100.00
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3. retro_ptro_478 84.44 100.00
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4. retro_ptro_983 87.88 100.00
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5. retro_ptro_1023 80.45 100.00
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6. retro_ptro_1114 78.63 98.48
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7. retro_ptro_1257 80.77 97.73
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8. retro_ptro_1555 80.00 96.97
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9. retro_ptro_1885 89.55 100.00
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10. retro_ptro_2376 55.56 99.24
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Download FASTA sequences of all ENSPTRG00000002666 retrocopies