Parental gene:

HAX1, ENSPTRG00000001380

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:132525377..132529222(+)


>ENSPTRG00000001380
ATGAGCCTCTTTGATCTCTTCCGGGGCTTTTTCGGCTTTCCTGGACCTCGGAGCCACAGAGATCCCTTTTTTGGAGGGAT
GACTCGAGATGAAGATGATGATGAGGAAGAAGAGGAAGAAGGGGGCTCATGGGGCCGTGGGAACCCAAGGTTCCATAGTC
CTCAGCACCCCCCTGAGGAATTTGGCTTCGGCTTCAGCTTCAGCCCAGGAGGAGGGATACGTTTCCACGATAACTTCGGC
TTTGATGACCTAGTACGAGATTTCGATAGCATCTTCAGCGATATGGGGGCCTGGACCTTGCCTTCCCATCCTCCTGAACT
TCCAGGTCCTGAGTCAGAGACACCTGGTGAGAGACTACGGGAGGGACAGACACTTCGGGACTCAATGCTTAAGTATCCAG
ATAGTCACCAGCCCAGGATCTTTGGGGGGGTCTTGGAGAGTGATGCAAGAAGTGAATCCCCCCAACCAGCACCAGACTGG
GGCTCCCAGAGGCCATTTCATAGGTTTGATGATGTATGGCCTATGGACCCCCATCCTAGAACCAGAGAGGACAATGATCT
TGATTCCCAGGTTTCCCAGGAGGGTCTTGGCCCGGTTCTACAGCCCCAGCCCAAATCCTATTTCAAGAGCATCTCTGTGA
CCAAGATCACTAAACCAGATGGGATAGTGGAGGAGCGCCGGACTGTGGTGGACAGTGAGGGCCGGACAGAGACTACAGTA
ACCCGACACGAAGCAGATAGCAGTCCTAGGGGTGATCCAGAATCACCAAGACCTCCAGCCCTGGATGATGCCTTTTCCAT
CCTGGACTTATTCCTAGGACGTTGGTTCCGGTCCCGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 46 .85 RPM
SRP007412_cerebellum 53 .20 RPM
SRP007412_heart 76 .36 RPM
SRP007412_kidney 54 .76 RPM
SRP007412_liver 60 .75 RPM
SRP007412_testis 64 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009660 ortholog_one2one 1 retrogene
retro_cjac_1888,
Dasypus novemcinctus ENSDNOG00000016727 ortholog_one2one 1 retrogene
retro_dnov_1537,
Dipodomys ordii ENSDORG00000012587 ortholog_one2one 1 retrogene
retro_dord_769,
Homo sapiens ENSG00000143575 ortholog_one2one 1 retrogene
retro_hsap_4912,
Microcebus murinus ENSMICG00000010414 ortholog_one2one 2 retrogenes
retro_mmur_1118, retro_mmur_1284,
Monodelphis domestica ENSMODG00000017215 ortholog_one2one 1 retrogene
retro_mdom_433,
Mus musculus ENSMUSG00000027944 ortholog_one2one 3 retrogenes
retro_mmus_1306, retro_mmus_2000, retro_mmus_353,
Nomascus leucogenys ENSNLEG00000011290 ortholog_one2one 1 retrogene
retro_nleu_2286,
Rattus norvegicus ENSRNOG00000045647 ortholog_one2many 1 retrogene
retro_rnor_736,
Tupaia belangeri ENSTBEG00000014445 ortholog_one2one 1 retrogene
retro_tbel_930,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3275 86.21 61.29
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Download FASTA sequences of all ENSPTRG00000001380 retrocopies