Parental gene:

ANP32B, ENSPPYG00000019430

Aliases:None
Description:acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:HGNC Symbol;Acc:16677]
Organism:Orangutan (Pongo abelii)
Coordinates:9:93754298..93788197(+)


>ENSPPYG00000019430
ATGGACATGAAGAGGAGGATCCACCTGGAGCTGAGGAACAGGACCCCGGCAGCTGTTCGAGAACTTGTCTTGGACAATTG
CAAATCAAATGATGGAAAAATTGAGGGCTTAACAGCTGAATTTGTGAACTTAGAGTTCCTCAGTTTAATAAATGTAGGCT
TGATCTCAGTTTCAAATCTCCCCAAGCTGCCTAAATTGAAAAAGCTTGAACTCAGTGAAAATAGAATCTTTGGAGGTCTG
GACATGTTAGCTGAAAAACTTCCAAATCTCACACATCTAAACTTAAGTGGAAATAAACTGAAAGATATCAGCACCTTGGA
ACCTTTGAAAAAATTAGAATGTCTGAAAAGCCTGGACCTCTTTAACTGTGAGGTTACCAACCTGAATGACTACCGAGAGA
GTGTCTTCAAGCTCCTGCCCCAGCTTACCTACTTGGATGGCTATGACCGAGAGGACCAGGAAGCACCTGACTCAGATGCC
GAGGTGGATGGTGTGGATGAAGAGGAAGAGGATGAAGAAGGAGAAGATGAGGAAGATGAGGAGGATGAGGATGGTGAAGA
AGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGATGATGATGAAGTCAGTGAGGAGGAAG
AAGAATTTGGACTTGATGAAGAAGACGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGCGGGAAAGGTGAAAAGAGG
AAGAGAGAAACAGATGATGAAGGAGAAGATGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 43 .07 RPM
SRP007412_cerebellum 44 .99 RPM
SRP007412_heart 45 .22 RPM
SRP007412_kidney 80 .98 RPM
SRP007412_liver 60 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005149 ortholog_one2many 6 retrogenes
retro_chof_1293, retro_chof_1456, retro_chof_19, retro_chof_2244, retro_chof_588, retro_chof_681,
Cavia porcellus ENSCPOG00000020118 ortholog_one2many 3 retrogenes
retro_cpor_1336, retro_cpor_493, retro_cpor_509,
Equus caballus ENSECAG00000012310 ortholog_one2many 2 retrogenes
retro_ecab_246, retro_ecab_826,
Echinops telfairi ENSETEG00000015514 ortholog_one2many 4 retrogenes
retro_etel_2053, retro_etel_2167, retro_etel_510, retro_etel_677,
Myotis lucifugus ENSMLUG00000004844 ortholog_one2many 2 retrogenes
retro_mluc_1787, retro_mluc_1788,
Macaca mulatta ENSMMUG00000012242 ortholog_one2one 1 retrogene
retro_mmul_2600,
Monodelphis domestica ENSMODG00000003261 ortholog_one2many 1 retrogene
retro_mdom_763,
Mustela putorius furo ENSMPUG00000006433 ortholog_one2many 1 retrogene
retro_mputfur_1392,
Mus musculus ENSMUSG00000028333 ortholog_many2many 1 retrogene
retro_mmus_2399,
Otolemur garnettii ENSOGAG00000006091 ortholog_one2many 2 retrogenes
retro_ogar_1915, retro_ogar_3282,
Pongo abelii ENSPPYG00000006595 within_species_paralog 2 retrogenes
retro_pabe_210, retro_pabe_2575,
Pteropus vampyrus ENSPVAG00000006569 ortholog_one2many 1 retrogene
retro_pvam_699,
Sorex araneus ENSSARG00000000804 ortholog_one2many 1 retrogene
retro_sara_549,
Tupaia belangeri ENSTBEG00000002189 ortholog_one2many 8 retrogenes
retro_tbel_1659, retro_tbel_2710, retro_tbel_2772, retro_tbel_3770, retro_tbel_3863, retro_tbel_4351, retro_tbel_4361, retro_tbel_491,
Tursiops truncatus ENSTTRG00000010825 ortholog_one2many 2 retrogenes
retro_ttru_1899, retro_ttru_341,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1312 94.33 55.78
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2. retro_pabe_1316 82.50 79.68
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Download FASTA sequences of all ENSPPYG00000019430 retrocopies