Parental gene:

ANP32A, ENSPPYG00000006595

Aliases:None
Description:acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:HGNC Symbol;Acc:13233]
Organism:Orangutan (Pongo abelii)
Coordinates:15:65976994..66019101(-)


>ENSPPYG00000006595
GAAATCAGGGCCTGTGGATGGAAGTTCCAGGGAGGGAGGCAACAAATCCACTTGACATTGGTGAAAGAACTTGTCCTGGA
CAACAGTCGGTCAAATGAAGGCAAACTCGAAGGCCTCACAGATGAATTTGAAGAACTGGAATTCTTAAGTACAATCAACG
TAGGCCTCACCTCAATCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAGTCTCAGGG
GGCCTGGAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCAC
AATAGAGCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGTAACCAACCTGAACGACTACC
GAGAAAATGTGTTCAAGCTCCTCCCGCAACTCACATATCTCGACGGCTATGACCGGGACGACAAGGAGGCCCCTGACTCG
GATGCTGAGGGCTATGTGGAGGGCCTGGATGATGAGGAGGAGGATGAGGACGAGGAGGAGTACGATGAAGATGCTCAGGT
AGTGGAAGACGAGGAGGACGAGGATGAGGAGGAGGAAGGTGAAGAGGAGGACGTGAGTGGAGAGGAGGAGGAGGATGAAG
AAGGTTATAACGATGGAGAGGTAGATGACGAGGAAGATGAAGAAGAGCTTGGTGAAGAAGAAAGGGGTCAGAAGCGAAAA
CGAGAACCTGAAGATGAGGGAGAAGATGATGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 94 .49 RPM
SRP007412_cerebellum 140 .69 RPM
SRP007412_heart 86 .16 RPM
SRP007412_kidney 107 .89 RPM
SRP007412_liver 71 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 possible_ortholog 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dasypus novemcinctus ENSDNOG00000015360 possible_ortholog 5 retrogenes
retro_dnov_1199, retro_dnov_1250, retro_dnov_1696, retro_dnov_836, retro_dnov_956,
Dipodomys ordii ENSDORG00000008611 ortholog_one2many 1 retrogene
retro_dord_240,
Felis catus ENSFCAG00000015773 possible_ortholog 1 retrogene
retro_fcat_1188,
Loxodonta africana ENSLAFG00000022560 ortholog_one2many 1 retrogene
retro_lafr_679,
Macaca mulatta ENSMMUG00000022717 ortholog_one2one 1 retrogene
retro_mmul_1985,
Otolemur garnettii ENSOGAG00000003058 possible_ortholog 1 retrogene
retro_ogar_2596,
Ochotona princeps ENSOPRG00000015394 possible_ortholog 2 retrogenes
retro_opri_302, retro_opri_563,
Pongo abelii ENSPPYG00000019430 within_species_paralog 2 retrogenes
retro_pabe_1312, retro_pabe_1316,
Rattus norvegicus ENSRNOG00000045651 possible_ortholog 1 retrogene
retro_rnor_1043,
Sarcophilus harrisii ENSSHAG00000010906 ortholog_one2many 1 retrogene
retro_shar_540,
Tupaia belangeri ENSTBEG00000016417 possible_ortholog 2 retrogenes
retro_tbel_4078, retro_tbel_4595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_210 93.80 52.23
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2. retro_pabe_2575 89.13 74.09
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Download FASTA sequences of all ENSPPYG00000006595 retrocopies