Parental gene:

OSTF1, ENSPPYG00000019300

Aliases:None
Description:osteoclast-stimulating factor 1 [Source:RefSeq peptide;Acc:NP_001127367]
Organism:Orangutan (Pongo abelii)
Coordinates:9:69961431..69984922(+)


>ENSPPYG00000019300
ATGCCAGATGAATTATACTTTGAGGAAGGTGATATTATCTACATTACTGACATGAGCGATACCAATTGGTGGAAAGGCAC
CTCCAAAGGCAGGACTGGACTAATTCCAAGCAACTATGTGGCTGAGCAGGCAGAATCCATTGACAATCCATTGCATGAAG
CAGCAAAAAGAGGCAACTTGAGCTGGTTGAGAGAGTGTTTGGACAACAGAGTGGGTGTTAATGGCTTAGACAAAGCTGGA
AGCACTGCCTTATACTGGGCTTGCCACGGGGGCCACAAAGATATAGTGGAAATGCTATTTACTCAACCAAATATTGAACT
GAACCAGCAGAACAAGCTGGGAGATACAGCTTTGCATGCTGCTGCCTGGAAGGGTTATGCAGATATCGTCCAGTTGCTTC
TGGCAAAAGGTGCTAGAACAGACTTAAGAAACATTGAGAAGAAGCTGGCCTTCGACATGGCTACCAATGCTGCCTGTGCA
TCTCTCCTGAAAAAGAAACAGGGAACAGATGCAGTTCGAACATTAAGCAATGCCGAGGACTATCTCGATGATGAAGACTC
AGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .84 RPM
SRP007412_cerebellum 13 .13 RPM
SRP007412_heart 8 .73 RPM
SRP007412_kidney 23 .27 RPM
SRP007412_liver 24 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012808 ortholog_one2one 1 retrogene
retro_cjac_3249,
Cavia porcellus ENSCPOG00000007226 ortholog_one2one 1 retrogene
retro_cpor_1049,
Dipodomys ordii ENSDORG00000002933 ortholog_one2one 1 retrogene
retro_dord_698,
Erinaceus europaeus ENSEEUG00000008320 ortholog_one2one 2 retrogenes
retro_eeur_545, retro_eeur_683,
Felis catus ENSFCAG00000022374 ortholog_one2one 1 retrogene
retro_fcat_1869,
Homo sapiens ENSG00000134996 ortholog_one2one 1 retrogene
retro_hsap_1058,
Gorilla gorilla ENSGGOG00000011920 ortholog_one2one 1 retrogene
retro_ggor_836,
Macaca mulatta ENSMMUG00000010401 ortholog_one2one 1 retrogene
retro_mmul_836,
Nomascus leucogenys ENSNLEG00000001854 ortholog_one2one 1 retrogene
retro_nleu_2502,
Otolemur garnettii ENSOGAG00000002603 ortholog_one2one 1 retrogene
retro_ogar_2962,
Pan troglodytes ENSPTRG00000021031 ortholog_one2one 1 retrogene
retro_ptro_720,
Rattus norvegicus ENSRNOG00000012156 ortholog_one2one 2 retrogenes
retro_rnor_936, retro_rnor_937,
Sus scrofa ENSSSCG00000005273 ortholog_one2one 1 retrogene
retro_sscr_979,
Tursiops truncatus ENSTTRG00000003081 ortholog_one2one 1 retrogene
retro_ttru_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_883 84.33 71.28
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Download FASTA sequences of all ENSPPYG00000019300 retrocopies