Parental gene:

OSBPL9, ENSPPYG00000001358

Aliases:OSBPL9, ORP-9
Description:oxysterol-binding protein-related protein 9 [Source:RefSeq peptide;Acc:NP_001125850]
Organism:Orangutan (Pongo abelii)
Coordinates:1:177982299..178156811(-)


>ENSPPYG00000001358
ATGGCGTCCATCATGGAAGGGCCGCTGAGCAAATGGACTAACGTGATGAAGGGCTGGCAGTACCGTTGGTTCGTGCTGGA
CTACAATGCAGGACTGCTCTCCTACTACACGTCCAAGGACAAAATGATGAGAGGCTCTCGCAGAGGATGTGTTAGACTCA
GAGGAGCTGTGATTGGTATAGACGATGAGGACGACAGCACCTTCACAATAACTGTTGATCAGAAAACCTTCCATTTCCAG
GCTCGTGATGCTGATGAGCGAGAGAAATGGATCCATGCCTTAGAAGAAACAATTCTTCGACATACTCTCCAGCTTCAAGG
TTTGGATTCAGGATTTGTTCCTAGTGTCCAAGATTTTGATAAGAAGCTTACAGAAGCTGATGCTTACCTACAAATCTTGA
TTGAACAATTAAAGCTTTTTGATGACAAGCTTCAAAACTGCAAAGAAGATGAACAGAGAAAGAAAATTGAGACTCTCAAA
GAGACAACAAATAGCATGGTAGAATCAATTAAACACTGCATTGTGTTGCTGCAGATTGCCAAAGACCAGAGTAATGCGGA
GAAGCACGCAGATGGAATGATAAGTACTATTAATCCCGTAGATGCAATATATCAACCTAGTCCTTTGGAACCTGTGATCA
GCACAATGCCTTCCCAGACTGTGTTACCTCCAGAACCTGTTCAGTTGTGTAAGTCAGAGCAGCGTCCATCTTCCCTACCA
GTTGGACCTGTGTTGGCTACCTTGGGACATCATCAGACTCCTACACCAAATAGTACAGGCAGTGGCCATTCACCACCGAC
TAGCAGTCTCACTTCTCCAAGCCATGTGAACTTGTCTCCAAATACAGTCCCAGAGTTCTCTTACTCCAGCAGTGAAGATG
AATTTTATGATGCTGATGAATTCCATCAAAGTGGCTCATCCCCAAAGCGCTTAATAGATTCTTCTGGATCTGCCTCAGTC
CTGACACACAGCAGCTCGGGAAATAGTCTAAAACGACCAGATACCACAGAATCACTTAATTCTTCCATGTCCAATGGAAC
AAGTGATGCTGACCTTTTCGATTCACATGATGACAGAGATGATGATGCGGAGGCAGGGTCTGTGGAGGAGCACAAGAGCG
TTATCATGCATCTCTTGTCACAGGTTAGACTTGGAATGGATCTTACTAAGGTAGTTCTTCCAACGTTTATTCTTGAAAGA
AGATCTCTTTTAGAAATGTATGCAGACTTTTTTGCACATCCGGACCTGTTTGTGAGCATTAGTGACCAGAAGGATCCCAA
GGATCGAATGGTTCAGGTTGTGAAATGGTACCTCTCAGCCTTTCATGCCGGAAGGAAAGGATCAGTTGCCAAAAAGCCAT
ACAATCCCATTTTGGGCGAGATTTTTCAGTGTCATTGGACGTTACCAAATGATACTGAAGAGAACACAGAATTAGTTTCA
GAAGGACCAGTTCCCTGGGTTTCCAAAAACAGTGTAACATTTGTGGCTGAGCAGGTTTCCCATCATCCACCCATTTCAGC
CTTTTATGCTGAGTGTTTTAACAAGAAGATACAATTCAATGCTCATATCTGGACCAAATCAAAATTCCTTGGGATGTCAA
TTGGGGTGCACAACATAGGACAGGGGTGTGTCTCATGTCTAGACTATGATGAACATTACATTCTCACATTCCCCAATGGC
TATGGAAGGTCTATCCTCACAGTGCCCTGGGTGGAATTAGGAGGAGAATGCAATATTAATTGTTCCAAAACAGGCTATAG
TGCAAATATCATCTTCCACACTAAACCCTTCTATGGGGGCAAGAAGCACAGAATTACTGCTGAGATTTTTTCTCCAAATG
ACAAGAAGTCTTTTTGCTCAATTGAAGGGGAATGGAATGGTGTGATGTATGCAAAATATGCAACAGGGGAAAATACAGTC
TTTGTAGATACCAAGAAGTTGCCTATAATCAAGAAGAAAGTGAGGAAGTTGGAAGATCAGAACGAGTATGAATCCCGCAG
CCTTTGGAAGGATGTCACTTTCAACTTAAAAATCAGAGACATTGATGCAGCAACTGAAGCAAAGCACAGGCTTGAAGAAA
GACAAAGAGCAGAAGCCCGAGAAAGGAAGGAGAAGGAAATTCAGTGGGAGACAAGGTTATTTCATGAAGATGGAGAATGC
TGGGTTTATGATGAACCATTACTGAAACGTCTTGGTGCTGCCAAGCATTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 15 .65 RPM
SRP007412_cerebellum 36 .24 RPM
SRP007412_heart 40 .88 RPM
SRP007412_kidney 39 .18 RPM
SRP007412_liver 34 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021574 ortholog_one2one 1 retrogene
retro_cjac_1235,
Felis catus ENSFCAG00000010298 ortholog_one2one 1 retrogene
retro_fcat_1134,
Gorilla gorilla ENSGGOG00000004787 ortholog_one2one 1 retrogene
retro_ggor_737,
Microcebus murinus ENSMICG00000002731 ortholog_one2one 1 retrogene
retro_mmur_1035,
Myotis lucifugus ENSMLUG00000009199 ortholog_one2one 1 retrogene
retro_mluc_2149,
Nomascus leucogenys ENSNLEG00000016138 ortholog_one2one 2 retrogenes
retro_nleu_1820, retro_nleu_279,
Oryctolagus cuniculus ENSOCUG00000004303 ortholog_one2one 1 retrogene
retro_ocun_281,
Pan troglodytes ENSPTRG00000000730 ortholog_one2one 1 retrogene
retro_ptro_632,
Ictidomys tridecemlineatus ENSSTOG00000000692 ortholog_one2one 1 retrogene
retro_itri_1537,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_689 96.82 85.46
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2. retro_pabe_787 80.51 51.90
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Download FASTA sequences of all ENSPPYG00000001358 retrocopies