Parental gene:

OSBPL9, ENSOCUG00000004303

Aliases:None
Description:oxysterol binding protein-like 9 [Source:HGNC Symbol;Acc:16386]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:13:114933925..115123313(-)


>ENSOCUG00000004303
ATGGCGTCCATCGTGGAAGGGCCGCTGAGCAAATGGACTAACGTGATGAAGGGCTGGCAGTACCGTTGGTTCGTGCTGGA
CTACAACGCTGGACTGCTTTCCTACTACACGTCCAAGGACAAGATGATGAGAGGCTCTCGCAGAGGATGTGTTAGACTCA
GAGGAGCTGTGATTGGTATAGACGATGAGGACGACAGCACCTTCACAATAACTGTTGATCAGAAAACCTTCCATTTCCAG
GCTCGTGATGCAGATGAGCGAGAGAAGTGGATCCATGCCTTAGAAGAAACAATTCTTCGGCATACTCTCCAGCTTCAAGG
TTTGGATTCAGGGTTTGTTCCTACTGTCCAAGACTTTGATAAAAAACTTACAGAGGCTGATGCTTACCTACAAATCTTGA
TAGAACAATTAAAGCTTTTTGATGACAAGCTTCAAAGCTGCAAAGATGATGAACAGAGAAAGAAAGTTGAAACTCTCAAA
GAGACAACAAATAGCATGGTAGAATCAATTAAACACTGCATTGTGTTGCTGCAGATTGCTAAAGACCAGAGTAATGCGGA
GAAGCACGCAGATGGAATTATAAGTACTATTAATCCTGTAGATGCAATATATCAGCCTAGTCCCTTGGAACCAGTGATCA
GCACAATGCCTTCCCAGACTGTCTTACCTCCAGAACCTGCTCAGTTGTGTAAGTCAGAGCAGCGTCCATCTTCCCTACCA
GTTGGACCTGTATTAGCTACTTTGGGACATCATCAAACTCCAACACCAAACAGTACAGGTAGTGGGCATTCACCACCTAG
TAGCAGTCTCACTTCTCCAAGCCATGTCAACTTGTCTCCAAATACAGTCCCAGAGTTCTCTTATTCTAGCAGTGAAGATG
AATTCTATGATGCTGACGAATTCCACCAAAGTGGCTCATCCCCAAAGCGCTTGATAGATTCTTCTGGATCTGCCTCTGTC
TTGACACACAGCAGCTCAGGAAATAGTATGAAGCGTCCAGATACCACAGAATCACTTAATTCCTCCATGTCTAATGGAAC
AAGTGATGCAGACCTTTTTGATTCGCATGACGATAGAGATGATGACGGAGAGGCAGGGTCAGTGGAGGAGCACAAGAGTG
TTATCATGCACCTCTTGTCACAGGTTAGGCTCGGAATGGATCTAACTAAGGTAGTTCTTCCAACATTCATTCTTGAAAGA
AGATCTCTTTTAGAAATGTATGCGGACTTTTTTGCACATCCGGACCTATTTGTGAGCATCAGTGACCAGAAGGAGCCTCG
AGAGCGAATGGTTCAGGTTGTGAAATGGTACCTCTCAGCCTTTCACGCAGGAAGGAAAGGATCAGTTGCCAAAAAGCCAT
ACAACCCCATTCTGGGCGAGATCTTTCAGTGTCACTGGACACTACCAAATGATACTGAGGAGAACGCAGAGCTAGTTTCC
GAAGGACCAGTTCCCTGGGTTTCCAAAAACAGTGTAACGTTCGTGGCTGAACAGGTTTCCCATCATCCACCCATTTCAGC
CTTTTATGCTGAGTGTTTTAACAAGAAGATCCAATTCAATGCTCATATCTGGACCAAATCAAAATTCCTTGGGATGTCGA
TTGGTGTGCACAACATAGGGCAGGGCTGTGTTTCGTGTCTGGACTACGATGAACATTACATCCTCACGTTTCCCAATGGT
TACGGAAGGTCTATCCTCACGGTGCCCTGGGTGGAATTGGGAGGAGAATGCAACATTAATTGTTCCAAAACGGGCTACAG
TGCAAATATCGTCTTCCACACTAAACCTTTCTATGGGGGCAAGAAACACAGAATCACTGCAGAGATCTTTTCTCCAAATG
ACAAGAAGTCTTTTTGTTCCATTGAAGGAGAGTGGAATGGTGTAATGTATGCAAAATACGCAACGGGGGAAAACACAGTC
TTTGTAGATACAAAGAAGTTGCCTATAATCAAGAAGAAAGTAAGGAAGTTGGAAGATCAGAATGAGTATGAGTCTCGCTG
TCTTTGGAAGGATGTCACTTTCAATCTAAAAATCAGAGACATTGATGCAGCCACTGAAGCAAAGCACAGACTTGAAGAAA
GACAAAGAGCAGAAGCCCGAGAAAGGAAGGAGAAGGAAATTCAGTGGGAGACAAGGTTGTTTCATGAAGATGGAGAATGT
TGGGTTTATGATGAGCCACTGCTGAAACGTCTTGGTGCTGCCAAGCATTAG

Library Parental gene expression (RPM)
SRP017611_brain 45 .64 RPM
SRP017611_kidney 164 .70 RPM
SRP017611_liver 61 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021574 ortholog_one2one 1 retrogene
retro_cjac_1235,
Felis catus ENSFCAG00000010298 ortholog_one2one 1 retrogene
retro_fcat_1134,
Gorilla gorilla ENSGGOG00000004787 ortholog_one2one 1 retrogene
retro_ggor_737,
Microcebus murinus ENSMICG00000002731 ortholog_one2one 1 retrogene
retro_mmur_1035,
Myotis lucifugus ENSMLUG00000009199 ortholog_one2one 1 retrogene
retro_mluc_2149,
Nomascus leucogenys ENSNLEG00000016138 ortholog_one2one 2 retrogenes
retro_nleu_1820, retro_nleu_279,
Pongo abelii ENSPPYG00000001358 ortholog_one2one 2 retrogenes
retro_pabe_689, retro_pabe_787,
Pan troglodytes ENSPTRG00000000730 ortholog_one2one 1 retrogene
retro_ptro_632,
Ictidomys tridecemlineatus ENSSTOG00000000692 ortholog_one2one 1 retrogene
retro_itri_1537,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_281 93.44 74.46
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Download FASTA sequences of all ENSOCUG00000004303 retrocopies