Parental gene:

SMU1, ENSOPRG00000011389

Aliases:None
Description:smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:HGNC Symbol;Acc:18247]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_569:14713..37686(-)


>ENSOPRG00000011389
GTGATCCGTCTCATCATGCAGTACCTGAAGGAGAACAGTTTGCACCGGGCCTTAGCCACTCTGCAGGAAGAGACCACTGT
GTCTTTGAATACCGTGGACAGCATTGAGAGTTTTGTGGCTGACATTAATAGTGGCCATTGGGATACTGTTTTACAGGCTA
TACAGTCTCTTAAACTGCCAGACAAAACCCTCATTGACCTGTATGAACAGGTTGTTCTGGAATTGATTGAGCTCCGTGAG
CTGGGTGCTGCCAGATCTCTTCTGAGACAGACTGACCCTATGATCATGTTGAAGCAGACACAGCCCGAGCGCTACATTCA
TCTGGAGAACCTCTTGGCCAGGTCTTACTTTGATCCTCGAGAGGCATACCCAGATGGAAGCAGTAAAGAGAAGAGAAGAG
CGGCCATTGCTCAGGCTCTCGCTGGGGAAGTCAGCGTCGTGCCTCCATCTCGTCTCATGGCATTGCTGGGACAGGCACTG
AAGTGGCAGCAGCACCAGGGGTTGCTTCCTCCTGGTATGACTATAGATTTGTTTAGAGGCAAAGCAGCTGTTAAGGATGT
GGAAGAAGAAAAGTTTCCCACACAGCTGAGCAGGCACATTAAGTTTGGTCAGAAATCCCACGTGGAGTGTGCTCGATTTT
CTCCAGATGGTCAGTATCTGGTCACTGGGTCTGTTGATGGCTTCATTGAAGTATGGAACTTCACTACTGGAAAAATTCGG
AAGGATCTGAAGTACCAAGCCCAGGATAACTTTATGATGATGGACGACGCTGTCCTGTGCATGTGTTTCAGCAGAGATAC
AGAAATGTTAGCGACTGGGGCTCAAGATGGAAAAATCAAGGTGTGGAAGATTCAGAGTGGACAGTGTTTAAGGAGATTTG
AAAGAGCGCACAGCAAAGGTGTCACCTGTCTGAGCTTTTCTAAGGATAGCAGTCAGATCCTTAGTGCCTCTTTTGACCAG
ACAATCAGAATTCATGGTTTAAAATCTGGGAAAACACTGAAGGAATTCCGTGGCCATTCCTCCTTTGTTAACGAGGCAAC
ATTTACACAAGATGGACATTACATCATTAGTGCATCTTCTGATGGCACTGTAAAGATCTGGAATATGAAGACCACAGAAT
GTTCAAATACCTTTAAATCCCTGGGGAGTACCGCGGGGACAGACATTACTGTCAACAGTGTGATCTTGCTTCCTAAGAAC
CCGGAGCACTTTGTGGTGTGCAACAGGTCTAACACAGTGGTCATCATGAACATGCAGGGACAGATTGTCAGAAGCTTCAG
CTCCGGTAAGAGAGAAGGTGGTGACTTTGTCTGCTGTGCCCTCTCCCCCCGCGGTGAATGGATCTACTGTGTTGGGGAGG
ACTTTGTGCTCTACTGTTTCAGCACAGTCACTGGCAAACTGGAGAGAACTTTGACAGTTCATGAGAAGGATGTGATTGGC
ATTGCCCATCACCCTCATCAGAACTTGATTGCTACCTACAGTGAAGATGGACTTCTAAAACTCTGGAAACCGTAA

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000006212 ortholog_one2one 1 retrogene
retro_cpor_819,
Homo sapiens ENSG00000122692 ortholog_one2one 1 retrogene
retro_hsap_457,
Gorilla gorilla ENSGGOG00000014802 ortholog_one2one 1 retrogene
retro_ggor_440,
Myotis lucifugus ENSMLUG00000016097 ortholog_one2one 1 retrogene
retro_mluc_213,
Monodelphis domestica ENSMODG00000003439 ortholog_one2one 1 retrogene
retro_mdom_965,
Pongo abelii ENSPPYG00000019140 ortholog_one2one 1 retrogene
retro_pabe_274,
Pan troglodytes ENSPTRG00000020853 ortholog_one2one 1 retrogene
retro_ptro_344,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_19 84.39 61.71
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2. retro_opri_741 84.39 61.71
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Download FASTA sequences of all ENSOPRG00000011389 retrocopies