Parental gene: | HNRNPA3, ENSOGAG00000028132 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:24941] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873567.1:9193075..9198993(-) |
>ENSOGAG00000028132
ATGGAGGTAAAACCGCCGCCCGGTCGCCCCCAGCCCGACTCCGGCCGTCGCCGCCGCCGCCGGGGGGAGGAGGGCCATGA
TCCAAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTACAGATGATAGTTTAAGAGAAC
AAGAACATTTTGAGAAATGGGGCACACTCACAGATTGTGTGGTAATGAGAGATCCCCAAACAAAACGTTCCAGGGGCTTT
GGTTTTGTGACTTACTCTTGTGTGGAAGAGGTGGATGCAGCAATGTGTGCTCGACCACACAAGGTTGATGGGCGTGTTGT
GGAACCAAAGAGAGCTGTTTCAAGAGAGGATTCTGTAAAGCCTGGTGCCCATCTTACAGTGAAGAAAATTTTTGTTGGTG
GTATTAAAGAAGATACAGAAGAATATAATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATG
GAAGACAGGCAGAGTGGAAAAAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACTGTTGATAAAATTGTTGT
TCAGAAATACCACACTATTAATGGGCATAATTGTGAAGTGAAAAAGGCCCTTTCTAAACAAGAGATGCAGTCTGCTGGAT
CACAAAGAGGTCGTGGAGGTGGATCTGGCAACTTTATGGGTCGGGGAGGAAACTTTGGAGGTGGTGGAGGTAATTTTGGC
CGTGGTGGAAACTTTGGTGGAAGAGGAGGATATGGTGGTGGAGGTGGTGGCAGCAGAGGTAGTTATGGAGGAGGTGATGG
TGGATACAATGGATTTGGAGGTGATGGTGGCGGGTTCGAATCCCCAGCCCAGACCCGCCAAACAACGACGGCTGCAACCA
AAGGTGGTGGACCAGGATATGGAAACCAAGGTGGCGGATATGGTGGTGGAGGAGGATATGATGGTTACAATGAAGGAGGA
AATTTTGGAGGTGGTAACTATGGTGGTGGTGGGAACTATAATGATTTTGGAAATTATAGTGGACAACAGCAATCAAATTA
TGGACCCATGAAAGGGGGCAGTTTTGGTGGAAGAAGCTCGGGCAGTCCATATGGTGGTGGTTATGGATCTGGTGGTGGAA
GTGGTGGATATGGTAGCAGAAGGTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013497 | ortholog_one2one | 12 retrogenes | |
| Ficedula albicollis | ENSFALG00000003215 | ortholog_one2many | 1 retrogene | |
| Gallus gallus | ENSGALG00000009250 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013622 | ortholog_one2one | 6 retrogenes | |
| Mus musculus | ENSMUSG00000059005 | possible_ortholog | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002743 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000002501 | other_paralog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015353 | other_paralog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000025948 | within_species_paralog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029707 | within_species_paralog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030251 | other_paralog | 2 retrogenes | |
| Pelodiscus sinensis | ENSPSIG00000003011 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000010380 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000018255 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000015988 | ortholog_one2one | 6 retrogenes | |
| Xenopus tropicalis | ENSXETG00000001806 | ortholog_one2many | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000000439 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_600 | 80.52 | 69.90 | Please wait, loading  |
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| 2. | retro_ogar_814 | 63.25 | 71.47 | Please wait, loading |
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| 3. | retro_ogar_1869 | 83.66 | 93.98 | Please wait, loading |
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| 4. | retro_ogar_1924 | 74.66 | 94.50 | Please wait, loading |
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| 5. | retro_ogar_2222 | 98.02 | 52.88 | Please wait, loading |
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| 6. | retro_ogar_2590 | 72.36 | 93.98 | Please wait, loading |
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| 7. | retro_ogar_3215 | 72.44 | 58.12 | Please wait, loading |
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Download FASTA sequences of all ENSOGAG00000028132 retrocopies