Parental gene:

UBL5, ENSOCUG00000029004

Aliases:None
Description:ubiquitin-like 5 [Source:HGNC Symbol;Acc:13736]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018833:401301..402367(-)


>ENSOCUG00000029004
ATGATCGAGGTTGTTTGCAACGACCGTCTGGGGAAGAAAGTCCGCGTTAAGTGCAACACCGATGACACCATCGGGGACCT
TAAGAAGCTGATCGCAGCCCAGACGGGGACCCGTTGGAACAAGATTGTCCTTAAGAAGTGGTACACGATTTTCAAGGACC
ACGTGTCGCTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTACCAA

Library Parental gene expression (RPM)
SRP017611_brain 57 .01 RPM
SRP017611_kidney 91 .83 RPM
SRP017611_liver 16 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012371 ortholog_one2one 2 retrogenes
retro_amel_1796, retro_amel_314,
Canis familiaris ENSCAFG00000032630 ortholog_one2one 5 retrogenes
retro_cfam_1482, retro_cfam_1733, retro_cfam_1953, retro_cfam_2125, retro_cfam_801,
Dasypus novemcinctus ENSDNOG00000006384 ortholog_one2one 5 retrogenes
retro_dnov_1858, retro_dnov_196, retro_dnov_2470, retro_dnov_2590, retro_dnov_860,
Dipodomys ordii ENSDORG00000006499 ortholog_one2one 6 retrogenes
retro_dord_122, retro_dord_124, retro_dord_132, retro_dord_444, retro_dord_514, retro_dord_534,
Gorilla gorilla ENSGGOG00000005999 possible_ortholog 1 retrogene
retro_ggor_173,
Loxodonta africana ENSLAFG00000012892 ortholog_one2one 2 retrogenes
retro_lafr_1245, retro_lafr_699,
Macropus eugenii ENSMEUG00000015506 ortholog_one2one 2 retrogenes
retro_meug_300, retro_meug_304,
Myotis lucifugus ENSMLUG00000027369 ortholog_one2one 2 retrogenes
retro_mluc_1516, retro_mluc_1766,
Mus musculus ENSMUSG00000084786 ortholog_one2many 1 retrogene
retro_mmus_98,
Ochotona princeps ENSOPRG00000013412 ortholog_one2one 2 retrogenes
retro_opri_228, retro_opri_687,
Rattus norvegicus ENSRNOG00000020442 ortholog_one2one 1 retrogene
retro_rnor_786,
Sarcophilus harrisii ENSSHAG00000010974 ortholog_one2one 1 retrogene
retro_shar_753,
Ictidomys tridecemlineatus ENSSTOG00000005286 ortholog_one2one 1 retrogene
retro_itri_966,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_755 72.97 100.00
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2. retro_ocun_1465 60.38 72.60
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Download FASTA sequences of all ENSOCUG00000029004 retrocopies