Parental gene:

YWHAE, ENSOCUG00000014607

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:16722512..16767779(+)


>ENSOCUG00000014607
ATGGATGATCGGGAGGATCTGGTGTACCAGGCGAAGCTGGCCGAGCAGGCTGAGCGATACGACGAAATGGTGGAATCAAT
GAAGAAAGTAGCAGGGATGGATGTGGAGCTGACAGTTGAAGAAAGAAACCTCTTATCTGTTGCATATAAAAATGTGATTG
GAGCTAGAAGAGCTTCCTGGAGAATAATCAGCAGCATTGAACAGAAAGAAGAAAACAAGGGAGGAGAAGAGAAGCTAAAA
ATGATTCGGGAGTATCGGCAAATGGTTGAGACTGAGCTAAAGTTAATTTGTTGTGACATTCTGGATGTACTGGACAAACA
CCTCATTCCAGCAGCTAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGGGACTACCACAGGTATCTGGCCG
AGTTTGCCACAGGAAATGACAGGAAGGAGGCTGCAGAGAACAGCCTAGTGGCTTATAAAGCTGCTAGTGATATTGCAATG
ACAGAACTTCCACCCACGCATCCCATTCGTTTAGGACTCGCTCTCAATTTTTCTGTATTCTACTATGAAATCCTTAATTC
CCCTGACCGTGCCTGCAGGTTGGCGAAAGCAGCTTTTGATGATGCAATTGCAGAACTGGATACGCTGAGTGAAGAAAGCT
ATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATGGACTTCAGACATGCAGGGGGATGGTGAA
GAGCAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAATCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 521 .36 RPM
SRP017611_kidney 257 .34 RPM
SRP017611_liver 123 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010861 possible_ortholog 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_many2many 1 retrogene
retro_cint_15,
Cavia porcellus ENSCPOG00000008007 possible_ortholog 1 retrogene
retro_cpor_307,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2many 2 retrogenes
retro_csav_13, retro_csav_9,
Dasypus novemcinctus ENSDNOG00000003808 possible_ortholog 2 retrogenes
retro_dnov_1452, retro_dnov_2602,
Felis catus ENSFCAG00000011368 possible_ortholog 1 retrogene
retro_fcat_1636,
Macropus eugenii ENSMEUG00000015460 ortholog_one2one 12 retrogenes
retro_meug_1290, retro_meug_1396, retro_meug_1536, retro_meug_16, retro_meug_1926, retro_meug_196, retro_meug_2153, retro_meug_2163, retro_meug_835, retro_meug_9, retro_meug_982, retro_meug_986,
Oryctolagus cuniculus ENSOCUG00000000734 other_paralog 2 retrogenes
retro_ocun_1091, retro_ocun_248,
Oryctolagus cuniculus ENSOCUG00000003002 other_paralog 1 retrogene
retro_ocun_273,
Oryctolagus cuniculus ENSOCUG00000010482 other_paralog 1 retrogene
retro_ocun_1463,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1062 76.09 70.98
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2. retro_ocun_1576 60.84 55.29
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Download FASTA sequences of all ENSOCUG00000014607 retrocopies