Parental gene:

YWHAE, ENSDNOG00000003808

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1690:5001..35391(-)


>ENSDNOG00000003808
AAAGGAGACTACCACAGGTATCTGGCTGAATTTGCCACGGGAAATGACAGGAAGGAGGCTGCAGAGAACAGCCTAGTGGC
TTATAAAGCTGCTAGTGATATTGCAATGACAGAACTTCCACCAACACATCCCATTCGCTTAGGTCTTGCTCTGAATTTTT
CTGTATTCTACTATGAAATTCTTAATTCCCCTGACCGCGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGATGCAATTGCA
GAACTGGATACCCTGAGTGAAGAAAGCTATAAGGACTCTACACTTATCATGCAGTTGTTACGTGATAATCTGACACTATG
GACTTCAGACATGCAGGGTGATGNNNNNNAGCAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAATCAGTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 84 .98 RPM
SRP012922_cerebellum 119 .87 RPM
SRP012922_heart 57 .08 RPM
SRP012922_kidney 72 .28 RPM
SRP012922_liver 35 .30 RPM
SRP012922_lung 62 .01 RPM
SRP012922_quadricep_muscle 81 .87 RPM
SRP012922_spleen 49 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010861 possible_ortholog 2 retrogenes
retro_chof_1912, retro_chof_905,
Ciona intestinalis ENSCING00000023856 ortholog_one2many 1 retrogene
retro_cint_15,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2one 2 retrogenes
retro_csav_13, retro_csav_9,
Dasypus novemcinctus ENSDNOG00000001672 other_paralog 10 retrogenes
retro_dnov_1007, retro_dnov_117, retro_dnov_1354, retro_dnov_1579, retro_dnov_1769, retro_dnov_1907, retro_dnov_1993, retro_dnov_2588, retro_dnov_892, retro_dnov_99,
Echinops telfairi ENSETEG00000012056 possible_ortholog 2 retrogenes
retro_etel_1762, retro_etel_738,
Gorilla gorilla ENSGGOG00000016840 possible_ortholog 1 retrogene
retro_ggor_2596,
Oryctolagus cuniculus ENSOCUG00000014607 possible_ortholog 2 retrogenes
retro_ocun_1062, retro_ocun_1576,
Pongo abelii ENSPPYG00000007769 possible_ortholog 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1452 90.41 55.73
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2. retro_dnov_2602 87.67 55.73
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Download FASTA sequences of all ENSDNOG00000003808 retrocopies