Parental gene:

MTAP, ENSOCUG00000012289

Aliases:None
Description:methylthioadenosine phosphorylase [Source:HGNC Symbol;Acc:7413]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:31902795..31959367(-)


>ENSOCUG00000012289
ATGGCCTCAGGTGCCGCCACCACCGCCGCCGTGAAGATTGGAATAATTGGTGGAACAGGCCTGGATGATCCAGAAATTTT
AGAAGGAAGAACTGAAAAGTATGTGGATACTCCATTTGGCAAGCCATCCGATGCCTTAATTTTGGGGAAAATAAAAAATG
TTGATTGCGTCCTCCTTGCCAGGCATGGGAGGCAGCACACCATCATGCCTTCCAAAGTCAACTACCAGGCAAACATCTGG
GCTTTGAAGGAGGAGGGTTGTACACATGTCATAGTGACCACAGCTTGTGGCTCCTTGAGGGAGGAGATTCAGCCCGGCGA
TATCGTCATTATCGATCAGTTCATCGACAGGACCATGACAAGGCCTCAGACCTTCTATGATGGAAGTCATTCCTGTGCCA
GAGGAGTATGCCATATTCCAATGGCTGAGCCATTTTGCCCCAAAACAAGAGAGGTCCTCATAGAGACTGCTAAGAAGCTA
GGACTCCGGTGCCACTCAAAGGGGACAATGGTCACAATTGAAGGACCGCGATTTAGCTCCCGGGCAGAAAGCTTCATGTT
CCGCACCTGGGGAGCGGATGTTATCAATATGACCACTGTTCCAGAGGTGGTTCTTGCCAAAGAGGCTGGAATTTGCTATG
CAAGTATTGCCATGGCAACAGATTATGATTGCTGGAAGGAGCACGAGGAAGCAGTTTCAGTGGACCGAGTCTTAAAGACC
CTGAAAGAAAATGCCAATAAAGCCAAAAGTTTGCTCCTCACCACCATACCTCAGATAGGGTCCACAGAATGGTCCGAAAC
CCTCCATAACCTGAAGAATATGGCCCAGTTTTCTGTTTTATTACCAAGACAT

Library Parental gene expression (RPM)
SRP017611_brain 9 .88 RPM
SRP017611_kidney 33 .04 RPM
SRP017611_liver 14 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002224 ortholog_one2one 1 retrogene
retro_chof_772,
Callithrix jacchus ENSCJAG00000008021 ortholog_one2many 2 retrogenes
retro_cjac_187, retro_cjac_950,
Cavia porcellus ENSCPOG00000000825 ortholog_one2one 1 retrogene
retro_cpor_375,
Dasypus novemcinctus ENSDNOG00000008670 ortholog_one2one 1 retrogene
retro_dnov_1572,
Echinops telfairi ENSETEG00000013214 ortholog_one2one 1 retrogene
retro_etel_588,
Macropus eugenii ENSMEUG00000015381 ortholog_one2one 2 retrogenes
retro_meug_807, retro_meug_917,
Microcebus murinus ENSMICG00000015072 ortholog_one2one 1 retrogene
retro_mmur_927,
Macaca mulatta ENSMMUG00000001137 ortholog_one2one 1 retrogene
retro_mmul_1549,
Ornithorhynchus anatinus ENSOANG00000013963 ortholog_one2one 1 retrogene
retro_oana_38,
Otolemur garnettii ENSOGAG00000007889 ortholog_one2one 1 retrogene
retro_ogar_3285,
Ochotona princeps ENSOPRG00000001259 ortholog_one2one 1 retrogene
retro_opri_792,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_341 84.91 100.00
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2. retro_ocun_1355 91.58 100.00
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Download FASTA sequences of all ENSOCUG00000012289 retrocopies