Parental gene:

ENSOCUG00000009154

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:11:57343490..57377029(+)


>ENSOCUG00000009154
ATGCACAGGAAACACCTCCAGGAGATTCCAGACCAGAGTGGCAACGTCACCACTAGTTTCACGTGGGGATGGGATTCCAG
CAAGACTTCTGAACTGCTGTCAGGCATGGGGGTCTCCGCCCTGGAGAAGGAGGAAGTGGACAGTGAAAACATCCCCCAGG
AACTGCTCTCCAATGTGGGCCACCCACAGAGCCCCCCGCGGAAACGCCTGAAGAGCAAAGGCAATGAGAAAGACTTCGTG
ATCATCCGCAGACCGAAGATCAATAGAGAAAATGTCCCAGGTGTTTCGTGGGATTCCCTTCCCGATGAGCTGCTCCTGGG
AATCTTTTCCTGTCTCTGCCTCCCCGAGCTACTGAAAGTCTCCGGGGTTTGTAAGAGATGGTACTGCCTAGCGTTTGATG
AGTCTCTGTGGCAGACATTAGACCTCACAGGTAAAAATCTGCACCCTGATGTGATTGGCCGCTTGTTGTCTCGAGGGGTG
GTTGCCTTCCGCTGCCCGCGATCATTTATGGACCGACCATTGGTTGAACATTTCAGCTCTTTCCGTGTGCAGCACATGGA
CCTGTCGAACTCAGTAATAAACGTGTCTACCCTTCACGGCATTCTGTCTCAGTGCTCCAAGTTGCAAAACCTAAGCCTGG
AAGGCCTACAGCTTTCGGATCTCATCGTCAATAATCTTGCACAGAACTCAAATTTAATGCGACTAAACCTTTGTGGGTGT
TCTGGATTCTCTGAATCTGCCCTGAAGACTTTGCTAAGCGGCTGCTCCAGACTGGATGAGCTGAACCTCTCCTGGTGCTA
TGACTTCACTGAGAAGCACGTGCAGGTGGCTGTGGCGCATGTCTCAGAGACCATCACCCAGCTGAATCTTAGTGGCTACC
GAAAGAATCTCCAAAAGTCAGATGTCTCTACCCTAGTTAGAAGATGCCCCAATCTTGTCCACCTAGACTTAAGTGACAGC
ATCATGCTAAAGAATGACTGCTTTCCGGAATTTCACCAGCTCAACTACCTCCAACACCTCTCACTCAGTCGATGCTATGA
TATAATACCTGAAACTTTACTTGAACTTGGAGAAATTCCCACGCTAAAAACACTACAAGTTTTCGGAATCGTGCCAGACG
GAACCCTCCAACTGCTAAGGGAAGCCCTTCCTCATCTACAGATTAATTGCTCCCATTTTACCACCATTGCCAGGCCAACT
ATTGGCAACAAAAAGAACCAGGAGATATGGGGCATCAAATGCCGACTGACACTGCAGAAACCCAGTTGTCTATGA

Library Parental gene expression (RPM)
SRP017611_brain 2 .65 RPM
SRP017611_kidney 1 .62 RPM
SRP017611_liver 3 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013562 ortholog_many2many 4 retrogenes
retro_btau_1108, retro_btau_1612, retro_btau_525, retro_btau_555,
Choloepus hoffmanni ENSCHOG00000006980 possible_ortholog 1 retrogene
retro_chof_1604,
Callithrix jacchus ENSCJAG00000018275 possible_ortholog 1 retrogene
retro_cjac_2367,
Cavia porcellus ENSCPOG00000013303 ortholog_one2many 1 retrogene
retro_cpor_1166,
Nomascus leucogenys ENSNLEG00000016025 ortholog_one2many 1 retrogene
retro_nleu_2553,
Pelodiscus sinensis ENSPSIG00000008375 ortholog_one2many 1 retrogene
retro_psin_28,
Rattus norvegicus ENSRNOG00000016823 ortholog_one2many 1 retrogene
retro_rnor_621,
Tupaia belangeri ENSTBEG00000016814 possible_ortholog 1 retrogene
retro_tbel_4354,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_158 100.00 99.53
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Download FASTA sequences of all ENSOCUG00000009154 retrocopies