Parental gene:

ENSOCUG00000008009

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:33181956..33193236(+)


>ENSOCUG00000008009
ATGGGACGGACCTCGAAAGACAAGCGAGATGTCTACTACCGCCTGGCCAAGGAGAATGGCTGGCGTGCCCGCAGCGCCTT
CAAACTGCTACAGCTGGATGAAGAGTTCCAGCTCTTTAAAGGTGTGACACGGGCAGTTGACCTGTGTGCAGCCCCAGGCA
GCTGGAGCCAGGTGCTGAGCCAGAAGATTGGGGGCCAAGGGTCTGGCCAAGTGGTGGCTGTGGACCTGCAAGCCATGGCT
CCGCTACCAGGTGTGACCCAGATCCAAGGGGACATCACCCAGCTGTCCACTGCCAAGGAAATCATTCAGCATTTTGAGGG
CTGCCCTGCAGACCTAGTGGTGTGCGACGGGGCTCCTGATGTAACTGGCCTCCATGACGTAGATGAGTACATGCAAGCCC
AGCTCCTCCTAGCAGCTCTGAATATTGCCACACACGTCCTAAAGCCGGGGGGCTGCTTCGTGGCCAAGATCTTCCGAGGC
CGGGATGTGACGCTGCTCTACAGCCAGCTGCGCATCTTCTTCTCCAGCGTGCTCTGTGCCAAGCCCAAGAGCAGCCGGAA
CTCCAGCATTGAGGCCTTTGCTGTCTGCCAGGGTTACGACCCTCCTGAGGGCTTCAAGCCGGACCTGAGCAAGCCCCTGC
TGGACCACTCGTACGATTTCAACCAGTTGGATGGACCCACCCGCATCATTGTGCCTTTTGTGACCTGTGGGGACCTGAGC
GCCTATGATTCGGATCGCAGTTATCCACTGGACCTACAGGATGGCTCTGAGTACAAGTACACCCCACCCACCCAGCCCCC
CATCGCACCCCCATACCAAGAGGCCTGCGTGTTGAAGAAGACTGGCCGGCTAGCCAAGGAGATCCGCCCTCAGGACTGCC
CCATCAGCAGAGCGGACGCATTGTCCCAGCCCCTGGCTGCCCCTCAGCGCCACACCCAGCTGGCCCCCGAGATGGAAGAT
AATGAAATTGAAATGAACTGTTCACATTAA

Library Parental gene expression (RPM)
SRP017611_brain 20 .25 RPM
SRP017611_kidney 20 .78 RPM
SRP017611_liver 11 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000031829 ortholog_many2many 1 retrogene
retro_btau_27,
Canis familiaris ENSCAFG00000015339 ortholog_one2many 1 retrogene
retro_cfam_544,
Erinaceus europaeus ENSEEUG00000001469 ortholog_one2many 1 retrogene
retro_eeur_222,
Echinops telfairi ENSETEG00000014092 ortholog_many2many 3 retrogenes
retro_etel_1697, retro_etel_1803, retro_etel_1928,
Myotis lucifugus ENSMLUG00000003977 ortholog_one2many 1 retrogene
retro_mluc_1329,
Otolemur garnettii ENSOGAG00000016174 ortholog_many2many 1 retrogene
retro_ogar_180,
Sorex araneus ENSSARG00000007091 ortholog_many2many 1 retrogene
retro_sara_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_870 57.00 62.31
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Download FASTA sequences of all ENSOCUG00000008009 retrocopies