Parental gene:

FTSJ1, ENSEEUG00000001469

Aliases:None
Description:FtsJ RNA methyltransferase homolog 1 (E. coli) [Source:HGNC Symbol;Acc:13254]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_626:46261..61266(+)


>ENSEEUG00000001469
ATGGGTCGGACATCGAAAGACAAGCGGGACGTGTACTACCGCCTGGCCAAGGAGAACGGCTGGCGTGCCCGCAGCGCCTT
CAAACTGCTACAGCTCGATGAGGAGTTCCAGCTCTTCCAAGGGGTGAAGCGAGCAGTTGACCTGTGTGCAGCCCCAGGCA
GCTGGAGCCAGGTGCTGAGCCAGAAGATCGGGAACCAGGGCTCTGGCCATGTGGTGGCCGTGGACCTCCAGGCCATGGCT
CCTCTGCCAGGTGTCATACAGATCCAGGGGGACATCACCCAGCTGTCTACTGCCAAGGAGATTATCCGGCACTTCGAGGG
CAGTTCTGCGGACCTAGTGGTGTGCGACGGGGCTCCTGATGTCACTGGCCTCCACGACGTGGATGAGTACATGCAAGCCC
AGCTCCTCCTAGCTGCTCTGAATATCGCCACACATGTCTTGAAGCCAGGAGGCAGCTTTGTAGCCAAGATCTTCCGAGGT
CGGGATGTGACACTGCTTTATAGCCAGCTGCGTGTCTTCTTCTCCAACGTGGTCTGTGCCAAGCCCCGAAGCAGCCGCAA
CTCAAGCATTGAGGCCTTCGCGGTCTGTCGTGGCTATGATCCTCCTGTGGGCTTCCTCCCGGACCTGTCCAAACCCCTGC
TGGACCATTCCTATGATCCTGATTTCAACCAGTTGGAAGGCCCCACCCGCATCATTGTGCCCTTCGTGACCTGTGGGGAC
CTGAGCGCCTATGATTCCGACCGCAGCTACCCTCTAGACTTAGAGGACGGCTCGGAGTACAAGTACACTCCACCCACGCA
GCCACCCATCTCACCACCGTACCAGGAGGCCTGCACATTGAAGAGGAGGGGGCGGCTGGCCAAGGAGATCCGCCCCCAG

Library Parental gene expression (RPM)
SRP017611_brain 48 .99 RPM
SRP017611_kidney 4 .13 RPM
SRP017611_liver 3 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000031829 ortholog_one2many 1 retrogene
retro_btau_27,
Canis familiaris ENSCAFG00000015339 ortholog_one2one 1 retrogene
retro_cfam_544,
Echinops telfairi ENSETEG00000014092 ortholog_one2many 3 retrogenes
retro_etel_1697, retro_etel_1803, retro_etel_1928,
Myotis lucifugus ENSMLUG00000003977 ortholog_one2one 1 retrogene
retro_mluc_1329,
Oryctolagus cuniculus ENSOCUG00000008009 ortholog_one2many 1 retrogene
retro_ocun_870,
Otolemur garnettii ENSOGAG00000016174 ortholog_one2many 1 retrogene
retro_ogar_180,
Sorex araneus ENSSARG00000007091 ortholog_one2many 1 retrogene
retro_sara_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_222 75.49 68.94
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Download FASTA sequences of all ENSEEUG00000001469 retrocopies