Parental gene:

PTPN2, ENSNLEG00000009074

Aliases:None
Description:Tyrosine-protein phosphatase non-receptor type [Source:UniProtKB/TrEMBL;Acc:G1RCW5]
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397401.1:2180420..2278297(-)


>ENSNLEG00000009074
ATGCCCACCAGCATCGAGCGGGAGTTCGAAGAGTTGGATACTCAGCGTCGCTGGCAGCCGCTGTACTTGGAAATTCGAAA
TGAGTCCCATGACTATCCTCATAGAGTGGCCAAGTTTCCAGAAAACAGAAATCGAAACAGATACAGAGATGTAAGCCCAT
ATGATCACAGTCGTGTTAAACTGCAAAATGCTGAGAATGATTATATTAATGCCAGTTTAGTTGACATAGAAGAGGCACAA
AGGAGTTACATCTTAACACAGGGTCCACTTCCTAACACATGCTGCCATTTCTGGCTTATGGTTTGGCAGCAGAAGACCAA
AGCAGTTGTCATGCTGAACCGCATTGTGGAGAAAGAATCGGTTAAATGTGCACAGTACTGGCCAACAGATGACCAAGAGA
TGCTGTTTAAAGAAACAGGATTCAGTGTGAAGCTCTTGTCAGAAGATGTGAAGTCGTATTATACAGTACATCTACTACAA
TTAGAAAATATCAATAGTGGTGAAACCAGAACAATATCTCACTTTCATTATACTACCTGGCCAGATTTTGGAGTCCCTGA
ATCACCAGCTTCATTTCTCAATTTCTTGTTTAAAGTGAGAGAATCTGGCTCCTTGAACCCTGACCATGGGCCTGCGGTGA
TCCACTGTAGTGCAGGCATTGGGCGCTCTGGCACCTTCTCTCTGGTAGACACTTGTCTTGTTTTGATGGAAAAAGGAGAT
GATATTAACATTAAACAAGTGTTACTGAACATGAGAAAATACCGAATGGGTCTTATTCAGACCCCAGATCAACTGAGATT
CTCGTACATGGCTATAATAGAAGGAGCAAAATGTATAAAGGGAGATTCTGGTATACAGAAACGATGGAAAGAACTTTCTA
AGGAAGACTTATCTCCTGCCTTTGATCATTCACCAAACAAAATAATGACTGAAAAATACAATGGGAACAGAATAGGTTTA
GAAGAAGAAAAACTGACAGGTGACCGATGTACAGGACTTTCCTCTAAAATGCAAGATACAATGGAAGAGAACAGTGAGAG
TGCTCTACGGAAACGTATTCGAGAGGACAGAAAGGCCACCACAGCTCAGAAGGTGCAGCAGATGAAACAGAGGCTAAATG
AGAATGAACGAAAAAGAAAAAGGTGGTTATATTGGCAACCTATTCTCACTAAGATGGGGTTTGTGTCAGTCATTTTGGTT
GGCGCTTTTGTTGGCTGGACACTGTTTTTTCAGCAAAATGCCCTA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000867 ortholog_one2one 1 retrogene
retro_chof_2231,
Callithrix jacchus ENSCJAG00000005102 ortholog_one2one 1 retrogene
retro_cjac_1577,
Dasypus novemcinctus ENSDNOG00000016588 ortholog_one2one 1 retrogene
retro_dnov_1466,
Erinaceus europaeus ENSEEUG00000005636 ortholog_one2one 1 retrogene
retro_eeur_370,
Echinops telfairi ENSETEG00000005577 ortholog_one2one 2 retrogenes
retro_etel_1743, retro_etel_1942,
Homo sapiens ENSG00000175354 ortholog_one2one 2 retrogenes
retro_hsap_1186, retro_hsap_480,
Gorilla gorilla ENSGGOG00000010259 ortholog_one2many 2 retrogenes
retro_ggor_453, retro_ggor_925,
Loxodonta africana ENSLAFG00000011818 ortholog_one2many 1 retrogene
retro_lafr_701,
Macropus eugenii ENSMEUG00000005156 ortholog_one2one 1 retrogene
retro_meug_653,
Monodelphis domestica ENSMODG00000021422 ortholog_one2one 1 retrogene
retro_mdom_1225,
Nomascus leucogenys ENSNLEG00000000078 other_paralog 5 retrogenes
retro_nleu_1200, retro_nleu_1360, retro_nleu_1654, retro_nleu_522, retro_nleu_561,
Otolemur garnettii ENSOGAG00000028605 ortholog_one2one 1 retrogene
retro_ogar_3429,
Pongo abelii ENSPPYG00000008983 ortholog_one2one 3 retrogenes
retro_pabe_1077, retro_pabe_1144, retro_pabe_989,
Pan troglodytes ENSPTRG00000009884 ortholog_one2one 2 retrogenes
retro_ptro_361, retro_ptro_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_351 96.51 89.64
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2. retro_nleu_894 90.30 78.80
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3. retro_nleu_2112 85.30 66.99
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Download FASTA sequences of all ENSNLEG00000009074 retrocopies