Parental gene:

IDH1, ENSNLEG00000007143

Aliases:None
Description:Isocitrate dehydrogenase [NADP] [Source:UniProtKB/TrEMBL;Acc:G1R682]
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397263.1:52748968..52777436(-)


>ENSNLEG00000007143
ATGTCCAAAAAAATCAGTGGCGGTTCTGTGGTAGAGATGCAAGGAGATGAAATGACACGAATCATTTGGGAATTGATTAA
AGAGAAACTCATTTTTCCCTACGTGGAATTGGATCTACATAGCTATGATTTAGGCATAGAGAATCGTGATGCCACCAACG
ACCAAGTCACCAAGGATGCTGCAGAAGCTATAAAGAAGTATAATGTTGGCGTCTGTGCCACTATCACTCCTGATGAGAAG
AGGGAGGAGTTTAAGTTGAAACAAATGTGGAAATCACCAAATGGGCACCATACGAAATATTTCTGGGTGGCACAGTTCTT
CAGAGAAGCCATTATCTGCAATATCCCCCGGCTTGTGAGTGGATGGGTAAAACCTATCATCATAGGTCGTCATGCTTATG
GGGATCAATACAGAGCAACTGATTTTGTTGTTCCTGGGCCTGGAAAAGTAGAGATAACCTACACACCAAGTGACGGAACC
CAAAAGGTGACATACCTGGTACATAACTTTGAAGAGGGTGGTGGTGTTGCCATGGGGATGTATAATCAAGATAAGTCAAT
TGAAGATTTTGCACACAGTTCCTTCCAAATGGCTCTGTCTAAGGGTTGGCCTTTGTATCTGAGCACCAAAAACACTATTC
TGAAGAAATATGATGGGCGTTTTAAAGACATCTTTCAGGAGATATATGACAAGCAGTACAAGTCCCAATTTGAAGCCCAA
AAGATCTGGTATGAGCATAGGCTCATCGATGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTGGGCCTG
TAAAAACTATGATGGTGACGTGCAGTCGGACTCTGTGGCCCAAGGGTATGGCTCTCTCGGCATGATGACCAGCGTGCTGG
TTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCACTACCGCATGTACCAGAAAGGA
CAGGAGACGTCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGGTTAGCCCACAGAGCAAAGCTTGATAACAA
TAAAGAGCTTGCCTTCTTTGCAAATGCTTTGGAAGAAGTCTCTATTGAGACAATTGAGGCTGGCTTCATGACCAAGGACT
TGGCTGCTTGCATTAAAGGTTTACCCAATGTGCAACGTTCTGACTACTTGAATACGTTTGAGTTCATGGACAAACTTGGA
GAAAACTTGAAGATCAAACTAGCTCAGGCCAAACTTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020527 ortholog_one2one 1 retrogene
retro_btau_1235,
Choloepus hoffmanni ENSCHOG00000004574 ortholog_one2one 2 retrogenes
retro_chof_2158, retro_chof_897,
Cavia porcellus ENSCPOG00000013587 ortholog_one2one 1 retrogene
retro_cpor_1010,
Homo sapiens ENSG00000138413 ortholog_one2one 1 retrogene
retro_hsap_3554,
Gorilla gorilla ENSGGOG00000012619 ortholog_one2one 1 retrogene
retro_ggor_2400,
Microcebus murinus ENSMICG00000009797 ortholog_one2one 1 retrogene
retro_mmur_1364,
Macaca mulatta ENSMMUG00000016077 ortholog_one2one 1 retrogene
retro_mmul_1817,
Otolemur garnettii ENSOGAG00000014848 ortholog_one2one 4 retrogenes
retro_ogar_1488, retro_ogar_2270, retro_ogar_2925, retro_ogar_3057,
Pongo abelii ENSPPYG00000013125 ortholog_one2one 2 retrogenes
retro_pabe_2935, retro_pabe_926,
Pan troglodytes ENSPTRG00000012865 ortholog_one2one 1 retrogene
retro_ptro_2415,
Sus scrofa ENSSSCG00000023264 ortholog_one2one 1 retrogene
retro_sscr_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_1169 92.49 88.59
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2. retro_nleu_2328 85.46 95.39
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3. retro_nleu_3117 93.54 100.00
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Download FASTA sequences of all ENSNLEG00000007143 retrocopies