Parental gene:

PHB, ENSNLEG00000002978

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397444.1:1884942..1896175(-)


>ENSNLEG00000002978
ATGGCTGCCAAAGTGTTTGAGTCCATTGGCAAGTTTGGCCTGGCCTTAGCTGTTGCAGGAGGCGTGGTGAACTCTGCCTT
ATATAATGTGGATGCTGGGCACAGAGCTGTCATCTTTGACCGGTTCCGTGGGGTGCAGGACATTGTGGTAGGGGAAGGGA
CTCACTTTCTCATCCCATGGGTACAGAAACCAATTATCTTTGACTGCCGTTCTCGACCACGTAATGTGCCAGTCATCACT
GGTAGCAAAGATTTACAGAATGTCAACATCACGCTGCGCATCCTCTTCCGGCCTGTCGCTAGCCAGCTTCCTCGCATCTT
CACCAGCATCGGAGAGGACTATGATGAGCGTGTGCTGCCGTCCATTACGACCGAGATCCTCAAGTCAGTGGTGGCTCGCT
TTGATGCTGGAGAACTAATCACCCAGAGAGAGCTGGTCTCCAGGCAGGTGAGCGACGACCTTACGGAGCGAGCCGCAACC
TTTGGGCTCATCCTGGATGACGTGTCCTTGACACATCTGACCTTCGGGAAGGAGTTCACAGAAGCGGTAGAAGCCAAACA
GGTGGCTCAGCAGGAAGCAGAGAGGGCCAGATTTGTGGTGGAAAAGGCTGAGCAACAGAAAAAGGCGGCCATCATCTCTG
CTGAGGGTGACTCCAAGGCAGCTGAGCTGATTGCCAACTCACTGGCCACCGCAGGGGATGGCCTGATCGAGCTGCGCAAG
CTGGAAGCTGCGGAGGACATCGCGTACCAGCTCTCACGCTCTCGGAACATCACCTACCTGCCGGCGGGGCAGTCCGTGCT
CCTGCAGCTGCCCCAGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004797 ortholog_one2one 1 retrogene
retro_acar_49,
Canis familiaris ENSCAFG00000016926 possible_ortholog 1 retrogene
retro_cfam_202,
Choloepus hoffmanni ENSCHOG00000007588 possible_ortholog 2 retrogenes
retro_chof_1159, retro_chof_2193,
Callithrix jacchus ENSCJAG00000007174 possible_ortholog 22 retrogenes
retro_cjac_1048, retro_cjac_1403, retro_cjac_1683, retro_cjac_1761, retro_cjac_1820, retro_cjac_2261, retro_cjac_2389, retro_cjac_2390, retro_cjac_2391, retro_cjac_2445, retro_cjac_2523, retro_cjac_2659, retro_cjac_2663, retro_cjac_2909, retro_cjac_4205, retro_cjac_570, retro_cjac_635, retro_cjac_662, retro_cjac_872, retro_cjac_937, retro_cjac_966, retro_cjac_980,
Erinaceus europaeus ENSEEUG00000006481 ortholog_one2one 3 retrogenes
retro_eeur_219, retro_eeur_285, retro_eeur_369,
Homo sapiens ENSG00000167085 ortholog_one2one 15 retrogenes
retro_hsap_1113, retro_hsap_1514, retro_hsap_161, retro_hsap_1640, retro_hsap_2170, retro_hsap_2692, retro_hsap_3534, retro_hsap_3750, retro_hsap_3868, retro_hsap_3869, retro_hsap_4186, retro_hsap_4888, retro_hsap_517, retro_hsap_617, retro_hsap_776,
Gorilla gorilla ENSGGOG00000028002 possible_ortholog 12 retrogenes
retro_ggor_124, retro_ggor_1722, retro_ggor_1876, retro_ggor_238, retro_ggor_2387, retro_ggor_246, retro_ggor_2607, retro_ggor_3053, retro_ggor_476, retro_ggor_643, retro_ggor_741, retro_ggor_870,
Macropus eugenii ENSMEUG00000005122 ortholog_one2one 1 retrogene
retro_meug_708,
Myotis lucifugus ENSMLUG00000008203 possible_ortholog 2 retrogenes
retro_mluc_116, retro_mluc_2190,
Macaca mulatta ENSMMUG00000000156 ortholog_one2one 13 retrogenes
retro_mmul_1096, retro_mmul_1119, retro_mmul_1165, retro_mmul_1425, retro_mmul_151, retro_mmul_1565, retro_mmul_2148, retro_mmul_2420, retro_mmul_426, retro_mmul_521, retro_mmul_834, retro_mmul_866, retro_mmul_933,
Monodelphis domestica ENSMODG00000012210 ortholog_one2one 1 retrogene
retro_mdom_812,
Otolemur garnettii ENSOGAG00000027015 possible_ortholog 1 retrogene
retro_ogar_968,
Procavia capensis ENSPCAG00000008851 ortholog_one2one 1 retrogene
retro_pcap_74,
Pan troglodytes ENSPTRG00000009376 ortholog_one2one 14 retrogenes
retro_ptro_1025, retro_ptro_1110, retro_ptro_154, retro_ptro_1656, retro_ptro_1817, retro_ptro_2401, retro_ptro_2545, retro_ptro_2841, retro_ptro_2964, retro_ptro_3256, retro_ptro_386, retro_ptro_451, retro_ptro_542, retro_ptro_686,
Rattus norvegicus ENSRNOG00000046799 possible_ortholog 18 retrogenes
retro_rnor_1058, retro_rnor_1416, retro_rnor_1540, retro_rnor_1542, retro_rnor_2398, retro_rnor_2399, retro_rnor_2610, retro_rnor_2653, retro_rnor_2815, retro_rnor_2826, retro_rnor_2848, retro_rnor_2855, retro_rnor_2909, retro_rnor_292, retro_rnor_2948, retro_rnor_2949, retro_rnor_543, retro_rnor_898,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_191 83.82 99.26
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2. retro_nleu_195 89.41 86.40
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3. retro_nleu_402 82.41 72.79
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4. retro_nleu_444 83.98 66.54
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5. retro_nleu_1190 86.73 72.06
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6. retro_nleu_1254 86.64 95.96
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7. retro_nleu_1326 82.43 54.41
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8. retro_nleu_1557 86.76 100.00
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9. retro_nleu_1755 74.69 59.19
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10. retro_nleu_1796 86.25 58.09
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11. retro_nleu_1874 77.82 100.00
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12. retro_nleu_2547 80.00 51.47
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13. retro_nleu_2573 89.71 100.00
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Download FASTA sequences of all ENSNLEG00000002978 retrocopies