Parental gene: | Psmb3, ENSMUSG00000069744 |
| Aliases: | Psmb3, AL033320, C10-II |
| Description: | proteasome (prosome, macropain) subunit, beta type 3 [Source:MGI Symbol;Acc:MGI:1347014] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:97703398..97713500(+) |
>ENSMUSG00000069744
ATGTCTATTATGTCCTATAATGGAGGGGCCGTCATGGCCATGAAGGGAAAGAACTGTGTGGCCATCGCTGCAGACAGACG
TTTCGGGATCCAGGCCCAGATGGTGACCACGGACTTCCAGAAGATCTTTCCCATGGGTGACAGGCTCTACATAGGCCTGG
CCGGCCTGGCCACTGACGTCCAGACAGTTGCCCAGCGTCTCAAGTTCCGACTGAACTTGTATGAGCTGAAAGAAGGTCGA
CAGATCAAGCCTTACACCCTCATGAGCATGGTGGCCAACCTCCTGTATGAGAAGCGGTTCGGTCCCTACTACACAGAGCC
TGTCATTGCTGGCCTGGACCCGAAGACCTTCAAGCCCTTCATTTGCTCTCTGGACCTCATTGGCTGTCCCATGGTGACTG
ATGACTTTGTAGTCAGTGGTACCTGCTCCGAACAAATGTATGGGATGTGTGAGTCTCTCTGGGAGCCCAACATGGATCCA
GAACACCTGTTTGAAACCATTTCTCAGGCCATGCTGAACGCGGTGGACCGGGATGCCGTGTCGGGCATGGGCGTCATCGT
CCACGTCATTGAGAAAGACAAGATCACCACCAGGACGCTGAAGGCCCGGATGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 22 .12 RPM |
| SRP007412_cerebellum | 17 .19 RPM |
| SRP007412_heart | 26 .43 RPM |
| SRP007412_kidney | 22 .37 RPM |
| SRP007412_liver | 25 .83 RPM |
| SRP007412_testis | 9 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004363 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016587 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008246 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000000987 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015275 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000014497 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000108294 | possible_ortholog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007067 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000002233 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004131 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000002997 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012363 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012614 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000594 | possible_ortholog | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002598 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008505 | possible_ortholog | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002270 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000012938 | possible_ortholog | 7 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014258 | possible_ortholog | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013010 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_41 | 94.63 | 100.00 | Please wait, loading  |
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| 2. | retro_mmus_46 | 95.12 | 100.00 | Please wait, loading |
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| 3. | retro_mmus_536 | 90.35 | 55.12 | Please wait, loading |
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| 4. | retro_mmus_1449 | 99.28 | 67.32 | Please wait, loading |
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| 5. | retro_mmus_1551 | 82.93 | 98.54 | Please wait, loading |
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| 6. | retro_mmus_1790 | 88.96 | 79.51 | Please wait, loading |
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| 7. | retro_mmus_1938 | 90.82 | 100.00 | Please wait, loading |
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| 8. | retro_mmus_2110 | 81.89 | 61.46 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000069744 retrocopies