Parental gene: | 2810417H13Rik, ENSMUSG00000040204 |
| Aliases: | 2810417H13Rik, AA409629, Ns5apt9, Ns5atp9, PAF15, Paf, mKIAA0101, p15(PAF) |
| Description: | RIKEN cDNA 2810417H13 gene [Source:MGI Symbol;Acc:MGI:1915276] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:65890236..65903266(+) |
>ENSMUSG00000040204
ATGGTGCGGACCAAAGCAAACTACGTTCCAGGAGCCTACAGAAAAGCGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGG
CTCCTCCACCTTTGTCACCAATTCTTCAAGTTCGTCGAGAAAAGCTGAAAATAAGTATGCAGGAGGGAACCCAGTCTGTG
TGCGCCCAACTCCCAAGTGGCAAAAAGGCATCGGGGAATTCTTCAGGCTGTCCCCTAAAGAGTCTAAAAAGGAAAACCAG
GCTCCTGAAGAAGCAGGAACCAGTGGCTTAGGAAAAGCAAAGAGAAAAGCTTGTCCTTTGCAACCTGATCACAGAGATGA
TGAAAACGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .68 RPM |
| SRP007412_cerebellum | 0 .52 RPM |
| SRP007412_heart | 0 .25 RPM |
| SRP007412_kidney | 1 .04 RPM |
| SRP007412_liver | 0 .44 RPM |
| SRP007412_testis | 3 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010763 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006482 | ortholog_one2one | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000014912 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000027710 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003982 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016561 | ortholog_one2one | 5 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000019643 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013732 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_378 | 94.55 | 100.00 | Please wait, loading  |
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| 2. | retro_mmus_1088 | 71.96 | 95.45 | Please wait, loading |
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| 3. | retro_mmus_1289 | 90.48 | 57.27 | Please wait, loading |
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| 4. | retro_mmus_1335 | 89.19 | 100.00 | Please wait, loading |
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| 5. | retro_mmus_1844 | 89.29 | 100.00 | Please wait, loading |
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| 6. | retro_mmus_2809 | 82.88 | 100.00 | Please wait, loading |
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| 7. | retro_mmus_2964 | 86.36 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000040204 retrocopies