Parental gene:

Dcun1d1, ENSMUSG00000027708

Aliases:Dcun1d1, Rp42, SCCRO, Tes3, pTes3
Description:DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2150386]
Organism:Mouse (Mus musculus)
Coordinates:3:35892104..35937445(-)


>ENSMUSG00000027708
ATGAACAAGTTGAAATCATCGCAGAAGGATAAAGTTCGTCAGTTTATGATCTTCACACAATCTAGTGAGAAAACTGCAGT
AAGTTGTCTTTCTCAAAATGACTGGAAGTTAGATGTTGCAACAGATAATTTTTTTCAAAATCCAGAACTTTATATACGGG
AGAGTGTAAAAGGATCGTTGGACAGGAAGAAGTTAGAGCAACTGTACACTAGATACAAAGACCCTCAGGATGAAAATAAA
ATTGGAATAGATGGTATACAGCAGTTCTGTGATGATCTGGCCCTCGATCCAGCCAGCATCAGTGTGTTGATCATTGCATG
GAAGTTCAGGGCGGCCACACAGTGCGAGTTCTCCAAACAGGAGTTCATGGATGGCATGACAGAGTTAGGATGTGACAGCA
TAGAAAAACTAAAGGCCCAAATACCCAAGATGGAACAAGAATTGAAAGAACCAGGACGATTTAAGGATTTTTACCAGTTT
ACTTTTAATTTTGCAAAGAATCCAGGACAAAAAGGATTAGATCTAGAAATGGCCATTGCTTACTGGAACTTAGTGCTTAA
TGGAAGATTTAAATTCTTAGACTTATGGAATAAATTTTTGTTGGAGCATCATAAACGATCAATACCAAAAGACACGTGGA
ATCTTCTGTTAGACTTCAGTTCAATGATTGCAGATGACATGTCCAATTATGATGAAGAAGGAGCATGGCCTGTCCTTATT
GATGACTTTGTGGAATTTGCACGCCCTCAAATTGCTGGGACAAAAAGTACAACAGTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 19 .20 RPM
SRP007412_cerebellum 15 .59 RPM
SRP007412_heart 13 .79 RPM
SRP007412_kidney 17 .29 RPM
SRP007412_liver 22 .39 RPM
SRP007412_testis 91 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013358 ortholog_one2one 14 retrogenes
retro_chof_1054, retro_chof_1129, retro_chof_1198, retro_chof_1373, retro_chof_1546, retro_chof_1728, retro_chof_2049, retro_chof_232, retro_chof_2329, retro_chof_2369, retro_chof_2373, retro_chof_479, retro_chof_767, retro_chof_812,
Callithrix jacchus ENSCJAG00000005148 ortholog_one2one 2 retrogenes
retro_cjac_1423, retro_cjac_2358,
Cavia porcellus ENSCPOG00000022086 ortholog_one2many 4 retrogenes
retro_cpor_1289, retro_cpor_756, retro_cpor_758, retro_cpor_870,
Dasypus novemcinctus ENSDNOG00000019073 ortholog_one2one 2 retrogenes
retro_dnov_1494, retro_dnov_840,
Echinops telfairi ENSETEG00000000166 ortholog_one2one 1 retrogene
retro_etel_1460,
Homo sapiens ENSG00000043093 ortholog_one2one 1 retrogene
retro_hsap_3502,
Gorilla gorilla ENSGGOG00000010767 ortholog_one2one 1 retrogene
retro_ggor_2368,
Macaca mulatta ENSMMUG00000010552 ortholog_one2one 1 retrogene
retro_mmul_1782,
Mustela putorius furo ENSMPUG00000002369 ortholog_one2one 1 retrogene
retro_mputfur_919,
Mus musculus ENSMUSG00000038506 within_species_paralog 1 retrogene
retro_mmus_2204,
Nomascus leucogenys ENSNLEG00000005983 ortholog_one2one 1 retrogene
retro_nleu_793,
Otolemur garnettii ENSOGAG00000000658 ortholog_one2one 1 retrogene
retro_ogar_3499,
Pan troglodytes ENSPTRG00000015661 ortholog_one2one 1 retrogene
retro_ptro_2374,
Tarsius syrichta ENSTSYG00000012276 ortholog_one2one 1 retrogene
retro_tsyr_669,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1009 98.84 100.00
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Download FASTA sequences of all ENSMUSG00000027708 retrocopies