Parental gene:

Psme1, ENSMUSG00000022216

Aliases:Psme1, AW413925, PA28a
Description:proteasome (prosome, macropain) 28 subunit, alpha [Source:MGI Symbol;Acc:MGI:1096367]
Organism:Mouse (Mus musculus)
Coordinates:14:55578122..55581529(+)


>ENSMUSG00000022216
ATGGCCACACTGAGGGTCCATCCCGAAGCCCAAGCCAAGGTGGATGTGTTCCGTGAAGACCTGTGTAGCAAGACAGAGAA
CCTGCTTGGGAGCTATTTTCCCAAGAAAATCTCAGAGTTGGATGCGTTCTTAAAGGAGCCAGCTCTCAATGAAGCCAACC
TGAGCAATCTGAAGGCTCCATTGGACATCCCAGTACCCGATCCAGTCAAAGAGAAAGAGAAGGAGGAGCGGAAGAAGCAA
CAGGAGAAGGAAGAGAAGGAAGAGAAGAAGAAAGGGGACGAAGACGACAAAGGTCCCCCCTGTGGCCCAGTGAACTGCAA
TGAGAAGATTGTGGTCCTCCTGCAACGCCTAAAACCTGAGATCAAGGATGTCACTGAGCAACTCAATCTGGTCACTACCT
GGTTGCAGCTACAGATACCTCGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATG
ACCAACCTTCACACCAAGCTGGAAGGCTTCCACACGCAGATCTCCAAGTACTTCTCCGAGAGGGGTGACGCCGTGGCCAA
AGCAGCCAAGCAGCCCCACGTGGGTGACTATCGGCAGCTGGTGCACGAGCTGGACGAGGCGGAGTACCAGGAGATCCGTC
TGATGGTCATGGAGATCCGAAATGCTTATGCTGTGTTATATGACATCATCCTGAAGAACTTTGAGAAGCTCAAGAAGCCC
CGTGGAGAAACCAAGGGAATGATCTATTGA

Library Parental gene expression (RPM)
SRP007412_brain 21 .54 RPM
SRP007412_cerebellum 20 .36 RPM
SRP007412_heart 80 .56 RPM
SRP007412_kidney 79 .40 RPM
SRP007412_liver 84 .19 RPM
SRP007412_testis 8 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016433 ortholog_one2many 1 retrogene
retro_amel_637,
Bos taurus ENSBTAG00000021395 ortholog_one2one 1 retrogene
retro_btau_1189,
Canis familiaris ENSCAFG00000011924 ortholog_one2one 1 retrogene
retro_cfam_246,
Equus caballus ENSECAG00000016855 ortholog_one2one 1 retrogene
retro_ecab_1001,
Felis catus ENSFCAG00000005583 ortholog_one2many 1 retrogene
retro_fcat_1567,
Macropus eugenii ENSMEUG00000014712 ortholog_one2one 1 retrogene
retro_meug_1052,
Mus musculus ENSMUSG00000079197 within_species_paralog 1 retrogene
retro_mmus_145,
Rattus norvegicus ENSRNOG00000019041 ortholog_one2many 1 retrogene
retro_rnor_50,
Tursiops truncatus ENSTTRG00000008620 ortholog_one2one 1 retrogene
retro_ttru_569,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_466 85.88 71.01
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Download FASTA sequences of all ENSMUSG00000022216 retrocopies