Parental gene:

PSME1, ENSBTAG00000021395

Aliases:None
Description:proteasome activator complex subunit 1 [Source:RefSeq peptide;Acc:NP_001019680]
Organism:Cow (Bos taurus)
Coordinates:10:20846748..20849410(-)


>ENSBTAG00000021395
ATGGCCACGCTCAGGGTCCTGCCCGAAGCCCAAGCCAAGGTGGATGTGTTCCGTGAAGACCTATGTACTAAGACAGAGAA
CCTGCTCGGGAGCTATTTTCCCAAGAAGATTTCTGAGTTGGATGCATTTTTAAAGGAGCCAGATCTCAATGAAGCCAACC
TGAGCAATCTGAAGGCCCCATTGGACATCCCAGTGCCTGATCCAGTCAAGGAGAAAGAGAAGGAGGAGCGGAGGAAACAG
CAGGAGAAGGAAGACAAGGATGAAAAGAAGAAAGGGGAAGATGAAGACAAAGGTCCTCCATGTGGCCCAGTGAGCTGCAA
TGAGAAGATTGTGGTCCTCCTGCAGCGGGTAAAGCCTGAGATCAAGGATGTCATTGAGAAGCTCAACCTGGTCACCACCT
GGCTGCAGCTGCAAATACCTCGGATTGAGGATGGGAATAATTTTGGAGTGGCTGTCCAGGAGAAGGTGTTTGAGCTGATG
ACTGCTCTTCACACCAAGCTGGAAGGCTTCCACACTCAAATTTCCAAGTATTTCTCTGAGCGCGGTGATGCTGTAACCAA
AGCAGCCAAGCAGCCCCATGTGGGTGATTATCGGCAACTGGTACACGAGCTGGATGAGGCAGAGTACCGGGATATCCGGC
TGATGGTCATGGAGATCCGCAATGCTTACGCTGTGTTATATGACATCATCCTGAAGAACTTCGAGAAGCTCAAGAAGCCC
AGGGGAGAAACAAAGGGAATGATCTATTGA

Library Parental gene expression (RPM)
ERP005899_liver 80 .89 RPM
ERP005899_muscle 175 .84 RPM
SRP017611_brain 11 .97 RPM
SRP017611_kidney 81 .14 RPM
SRP017611_liver 55 .95 RPM
SRP030211_testis 28 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016433 possible_ortholog 1 retrogene
retro_amel_637,
Bos taurus ENSBTAG00000019918 within_species_paralog 2 retrogenes
retro_btau_1249, retro_btau_941,
Canis familiaris ENSCAFG00000011924 ortholog_one2one 1 retrogene
retro_cfam_246,
Equus caballus ENSECAG00000016855 ortholog_one2one 1 retrogene
retro_ecab_1001,
Felis catus ENSFCAG00000005583 possible_ortholog 1 retrogene
retro_fcat_1567,
Macropus eugenii ENSMEUG00000014712 ortholog_one2one 1 retrogene
retro_meug_1052,
Mus musculus ENSMUSG00000022216 ortholog_one2one 1 retrogene
retro_mmus_466,
Rattus norvegicus ENSRNOG00000019041 ortholog_one2many 1 retrogene
retro_rnor_50,
Tursiops truncatus ENSTTRG00000008620 ortholog_one2one 1 retrogene
retro_ttru_569,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1189 71.69 83.94
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000021395 retrocopies