Parental gene:

Zcchc10, ENSMUSG00000018239

Aliases:Zcchc10, 2410141K03Rik, AA675321, D11Ertd416e
Description:zinc finger, CCHC domain containing 10 [Source:MGI Symbol;Acc:MGI:1196228]
Organism:Mouse (Mus musculus)
Coordinates:11:53324678..53333301(+)


>ENSMUSG00000018239
ATGGCGACTCCCATGCATCGGCTCATAGCTCGAAGGAAAGCTGAAGCCAATAAGCAACATGTAAGATGTCAGAAATGCTT
GGAATTTGGACATTGGACTTATGAATGCAAAGGGAAAAGAAAGTACCTACACAGACCTTCGAGAACGGCAGAGCTGAAGA
AAGCTTTAAAAGAAAAAGAAAATAGATTATTGCTGCAAAGCATAGGAGAGACCAACATAGAGAAAAAGATCAAGAAGAAG
AAGAGGTCTAAGAGTGTCACGAGTTCCAGTACCTCTAGCAGTGACAGTTCGGCCAGTGAGTCTTCATCAGAGAGTGAGAC
ATCCGCCTCATCCTCTTCAGAAGACAGTGACTCAGATGAAAGCCTCTCTAGCTCCTCCTCCTCCTCCTCTTCCTCGGCCT
GTTCGTCTTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCGGACTCGGACTCCAGCTCGTCCAGCAGCAGCAGCAGCAGC
AGTTCTGAGAGCAGCTCTGATGATGAGCCACAGAAGAAGAAAAAGAAGAAGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain 5 .12 RPM
SRP007412_cerebellum 5 .99 RPM
SRP007412_heart 3 .14 RPM
SRP007412_kidney 3 .93 RPM
SRP007412_liver 2 .43 RPM
SRP007412_testis 3 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031203 ortholog_one2many 1 retrogene
retro_cfam_643,
Choloepus hoffmanni ENSCHOG00000001420 ortholog_one2many 9 retrogenes
retro_chof_1243, retro_chof_1263, retro_chof_1773, retro_chof_2048, retro_chof_2132, retro_chof_2183, retro_chof_501, retro_chof_790, retro_chof_923,
Dasypus novemcinctus ENSDNOG00000017302 ortholog_one2many 1 retrogene
retro_dnov_257,
Myotis lucifugus ENSMLUG00000011366 ortholog_many2many 4 retrogenes
retro_mluc_172, retro_mluc_2240, retro_mluc_2241, retro_mluc_2574,
Monodelphis domestica ENSMODG00000013827 ortholog_one2many 1 retrogene
retro_mdom_1405,
Otolemur garnettii ENSOGAG00000032171 ortholog_one2many 1 retrogene
retro_ogar_3011,
Pongo abelii ENSPPYG00000015776 ortholog_one2many 1 retrogene
retro_pabe_2395,
Rattus norvegicus ENSRNOG00000006943 ortholog_one2many 3 retrogenes
retro_rnor_2037, retro_rnor_2528, retro_rnor_801,
Sorex araneus ENSSARG00000007221 ortholog_one2many 1 retrogene
retro_sara_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_269 72.29 93.26
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000018239 retrocopies