Parental gene:

ZCCHC10, ENSPPYG00000015776

Aliases:None
Description:zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954]
Organism:Orangutan (Pongo abelii)
Coordinates:5:134457909..134488424(-)


>ENSPPYG00000015776
ATGGCGACTCCCATGCATCGGCTGATAGCCCGGAGACAAGCTGAAGCAAATAAGCAACATGTAAGATGTCAGAAATGCTT
GGAATTTGGACATTGGACTTATGAATGCACAGGAAAAAGAAAATACCTACATAGGCCCTCAAGGACAGCAGAACTAAAGA
AAGCTTTAAAAGAAAAAGAAAACAGATTATTATTACAACAAAGCATTGGAGAAACCAATGTAGAAAGAAAGGCCAAGAAA
AAAAGGTCTAAGAGTGTAACCAGTTCCAGTAGCAGTAGCAGTGACAGTTCTGCCAGTGATTCTTCATCAGAGAGTGAAGA
AACATCTACCTCTTCCTCCTCAGAGGACAGTGACACTGATGAAAGCTCCTCTAGTTCCTCATCCTCAGCCTCCTCCACAA
CCTCTTCCTCCTCCTCTGATTCAGACTCAGATTCCAGTTCTTCGAGTAGCAGTAGCACCAGCACAGAGAGCAGCTCTGAC
GATGAACCACCAAAGAAGAAGAAAAAGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .10 RPM
SRP007412_cerebellum 9 .97 RPM
SRP007412_heart 5 .00 RPM
SRP007412_kidney 4 .08 RPM
SRP007412_liver 3 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001420 ortholog_one2one 9 retrogenes
retro_chof_1243, retro_chof_1263, retro_chof_1773, retro_chof_2048, retro_chof_2132, retro_chof_2183, retro_chof_501, retro_chof_790, retro_chof_923,
Dasypus novemcinctus ENSDNOG00000017302 ortholog_one2one 1 retrogene
retro_dnov_257,
Myotis lucifugus ENSMLUG00000011366 possible_ortholog 4 retrogenes
retro_mluc_172, retro_mluc_2240, retro_mluc_2241, retro_mluc_2574,
Monodelphis domestica ENSMODG00000013827 ortholog_one2one 1 retrogene
retro_mdom_1405,
Mus musculus ENSMUSG00000018239 ortholog_one2many 1 retrogene
retro_mmus_269,
Rattus norvegicus ENSRNOG00000006943 ortholog_one2one 3 retrogenes
retro_rnor_2037, retro_rnor_2528, retro_rnor_801,
Sorex araneus ENSSARG00000007221 ortholog_one2one 1 retrogene
retro_sara_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2395 73.41 98.82
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Download FASTA sequences of all ENSPPYG00000015776 retrocopies