Parental gene:

Cdc20, ENSMUSG00000006398

Aliases:Cdc20, 2310042N09Rik, C87100, p55CDC
Description:cell division cycle 20 [Source:MGI Symbol;Acc:MGI:1859866]
Organism:Mouse (Mus musculus)
Coordinates:4:118432900..118437352(-)


>ENSMUSG00000006398
ATGGCGCAGTTCGTGTTCGAGAGCGATTTGCACTCACTGCTTCAACTGGACGCACCCATCCCCAATGCCCCGGTTGCGCG
CTGGCAGCGCAAAGCAAAGGAAGCCACAGGCCCAGCCCCCTCGCCCATGCGGGCCGCCAACAGATCACACAGCGCCGGGC
GGACCCCGGGCCGAACTCCTGGCAAATCTAGTTCCAAGGTTCAGACCACCCCTAGCAAACCTGGAGGTGACCGCTTTATC
CCCCAACGCAGTGCTTCTCAAATGGAGGTGGCCAGCTTCCTCTTAAGCAAGGAAAACCAGCCGGAAGACAGGGGGACGCC
CACCAAAAAGGAGCATCAGAAAGCCTGGTCTCTCAACCTGAACGGTTTTGATGTGGAGGAAGCCAAGATCCTCAGGCTCA
GCGGCAAACCTCAGAATGCCCCAGAAGGCTACCAGAACAGACTGAAAGTACTGTACAGTCAGAAAGCCACGCCTGGCTCC
AGCAGGAAGACTTGCAGATACATCCCTTCTCTGCCAGACAGGATCCTTGATGCCCCCGAAATCCGGAATGACTACTACCT
GAATCTTGTAGATTGGAGCTCTGGAAATGTATTGGCTGTGGCACTGGACAACAGTGTGTACTTATGGAACGCTGGTTCTG
GTGACATCCTGCAGTTGTTGCAAATGGAGCAGCCTGGAGACTACATATCCTCGGTGGCCTGGATCAAGGAGGGCAACTAC
CTAGCTGTAGGCACCAGCAATGCTGAGGTCCAGCTCTGGGATGTGCAGCAGCAGAAACGACTTCGAAACATGACCAGTCA
CTCCGCTCGAGTAAGCTCCCTCAGTTGGAACAGCTATATCCTATCCAGTGGTTCACGGTCTGGCCACATCCACCACCATG
ATGTTCGGGTAGCAGAACACCATGTGGCCACACTGAGTGGCCATAGCCAGGAAGTATGTGGGCTTCGCTGGGCCCCAGAT
GGACGACATCTGGCAAGTGGTGGCAATGATAACATTGTCAACGTGTGGCCTAGTGGTCCTGGAGAAAGTGGATGGGCTCC
CCTGCAAACATTCACTCAACATCAAGGCGCTGTCAAGGCTGTGGCATGGTGTCCCTGGCAGTCCAATATCCTGGCAACAG
GAGGAGGAACCAGTGACCGGCACATTCGCATTTGGAACGTCTGCTCAGGGGCCTGTCTGAGTGCTGTGGATGTGCATTCC
CAGGTGTGCTCCATCCTCTGGTCTCCCCACTATAAGGAGCTGATCTCAGGTCACGGCTTTGCCCAGAACCAGCTGGTTAT
TTGGAAGTATCCAACCATGGCCAAGGTGGCTGAGCTCAAAGGACACACAGCACGGGTCCTGGGTCTTACAATGAGTCCAG
ATGGGGCCACAGTGGCATCAGCAGCAGCTGATGAGACTCTACGGTTGTGGCGCTGCTTTGAGATGGACCCTGCCCTTCGG
CGTGAGCGGGAAAAAGCCAGTGTAGCTAAAAGTAGCCTCATCCACCAAGGCATCCGTTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .51 RPM
SRP007412_cerebellum 1 .56 RPM
SRP007412_heart 1 .37 RPM
SRP007412_kidney 1 .31 RPM
SRP007412_liver 0 .41 RPM
SRP007412_testis 97 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006680 ortholog_one2one 2 retrogenes
retro_chof_2172, retro_chof_2286,
Callithrix jacchus ENSCJAG00000003414 ortholog_one2one 1 retrogene
retro_cjac_1608,
Homo sapiens ENSG00000117399 ortholog_one2one 1 retrogene
retro_hsap_4187,
Gorilla gorilla ENSGGOG00000010419 ortholog_one2many 1 retrogene
retro_ggor_96,
Nomascus leucogenys ENSNLEG00000013419 ortholog_one2one 1 retrogene
retro_nleu_2847,
Pongo abelii ENSPPYG00000001448 ortholog_one2one 1 retrogene
retro_pabe_3428,
Pan troglodytes ENSPTRG00000000634 ortholog_one2one 1 retrogene
retro_ptro_2843,
Tarsius syrichta ENSTSYG00000012703 ortholog_one2one 3 retrogenes
retro_tsyr_1560, retro_tsyr_442, retro_tsyr_938,
Tursiops truncatus ENSTTRG00000010813 ortholog_one2one 1 retrogene
retro_ttru_1309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1536 93.12 69.74
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Download FASTA sequences of all ENSMUSG00000006398 retrocopies