Parental gene:

Chtop, ENSMUSG00000001017

Aliases:Chtop, 2500003M10Rik, C81330, Fop, Srag
Description:chromatin target of PRMT1 [Source:MGI Symbol;Acc:MGI:1913761]
Organism:Mouse (Mus musculus)
Coordinates:3:90498955..90509498(-)


>ENSMUSG00000001017
ATGCTGAAGAACAAACAGCCGATGCCAGTGAATATTCGGGCTTCGATGCAGCAGCAGCAGCAGCTAGCCAGTGCCAGAAA
CAGAAGACTGGCCCAGCAGATGGAGAATAGACCCTCTGTCCAGGCAGCATTAAAACTTAAGCAGAAGAGCTTAAAGCAGC
GCCTGGGTAAGAGTAATATCCAGGCACGGTTAGGCCGACCCATAGGTGCCCTGGCCAGGGGAGCAATTGGAGGAAGAGGC
CTACCCATAATCCAGAGAGGCTTGCCCCGAGGAGGACTACGTGGGGGACGTGCTACCAGAACCCTGCTTAGGGGTGGGAT
GTCGCTCCGAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAGGTGGTGTTCGAG
GTCGTGGAGGTCCTGGGAGAGGGGGCCTAGGGCGTGGAGCTATGGGTCGTGGCGGAATCGGTGGTAGAGGTCGGGGTATG
ATAGGTCGGGGAAGAGGGGGCTTTGGAGGCAGAGGCCGAGGTCGTGGCCGAGGGAGAGGTGCCCTCACTCGCCCTGTATT
GACCAAGGAGCAGCTGGACAACCAATTGGATGCATACATGTCGAAAACTAAAGGACACCTGGATGCTGAATTGGATGCCT
ACATGGCACAGACAGATCCTGAAACCAATGATTGA

Library Parental gene expression (RPM)
SRP007412_brain 93 .59 RPM
SRP007412_cerebellum 79 .46 RPM
SRP007412_heart 64 .75 RPM
SRP007412_kidney 55 .73 RPM
SRP007412_liver 41 .21 RPM
SRP007412_testis 62 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013518 ortholog_one2one 1 retrogene
retro_chof_6,
Callithrix jacchus ENSCJAG00000010383 ortholog_one2one 3 retrogenes
retro_cjac_2059, retro_cjac_423, retro_cjac_431,
Felis catus ENSFCAG00000002740 ortholog_one2one 1 retrogene
retro_fcat_1925,
Myotis lucifugus ENSMLUG00000016098 ortholog_one2many 2 retrogenes
retro_mluc_201, retro_mluc_247,
Rattus norvegicus ENSRNOG00000012760 ortholog_one2many 1 retrogene
retro_rnor_1095,
Ictidomys tridecemlineatus ENSSTOG00000000660 ortholog_one2one 1 retrogene
retro_itri_1169,
Tupaia belangeri ENSTBEG00000012442 ortholog_one2one 1 retrogene
retro_tbel_293,
Vicugna pacos ENSVPAG00000010259 ortholog_one2one 1 retrogene
retro_vpac_353,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1693 77.59 77.23
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_1852 95.58 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000001017 retrocopies