Parental gene:

EIF3I, ENSMODG00000017481

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit I [Source:HGNC Symbol;Acc:3272]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:425607918..425612818(+)


>ENSMODG00000017481
CAGAAGCCAATCCTGCTCCAGGGCCACGAGCGATCCATTACGCAGATCAAGTACAACCGCGAGGGAGACCTGCTCTTCAC
TGTGGCCAAGGACCCGATTGTCAATGTGTGGTACTCAGTGAACGGCGAGAGGCTGGGCACCTACACTGGACACACTGGAG
CTGTGTGGTGTGTGGATGCTGACTGGGACACCAAACATGTCCTTACTGGCTCCGCTGACAACAGCTGCCGTCTCTGGGAT
TGTGAAACAGGGAAACAACTGGCTCTGCTGAAGACCAACTCAGCTGTCCGTACGTGTGGCTTCGACTTTGGGGGCAATAT
CATCATGTTCTCCACAGACAAACAGATGGGGTACCAGTGCTTTGTCAGTTTCTTTGACCTACGAGACCCTAGCCAGATCG
ATAGCAATGAACCCTATATGAAGATCCCCTGTAATGCTGATGCTAAAATCACAAGTGCCGTGTGGGGACCCTTGGGGGAA
TGCATCATTGCTGGCCATGAAAATGGGGAGCTCAACCAATACAGTGCTAAGTCTGGAGAAGTGATGGTGAATGTTAAGGA
ACATTCAAGGCAGATCAACGACATTCAGACCTCTCGAGATATGACAATGTTTGTCACTGCATCCAAGGACAATACAGCCA
AGCTCTTTGACTCCACAACACTTGAGCACCAGAAAACATTCAGGACTGAGCGACCTGTCAACTCAGCTGCTCTTTCCCCC
ATCTATGACCACGTAGTCCTGGGTGGTGGACAGGAGGCCATGGATGTAACCACAACCTCCACCAGAATTGGCAAATTTGA
AGCCAGGTTCTTCCATCTTGCCTTTGAAGAGGAGTTTGGAAGAGTCAAAGGTCACTTTGGTCCCATTAACAGTGTTGCTT
TCCATCCTGATGGCAAGAGCTACAGCAGCGGTGGAGAAGACGGCTACGTCAGAATTCACTACTTCGATCCACAATACTTT
GAGTTTGAGTTTGAGGCATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010674 ortholog_one2one 1 retrogene
retro_cfam_321,
Callithrix jacchus ENSCJAG00000006810 ortholog_one2many 1 retrogene
retro_cjac_3104,
Echinops telfairi ENSETEG00000008047 ortholog_one2one 1 retrogene
retro_etel_1497,
Homo sapiens ENSG00000084623 ortholog_one2one 2 retrogenes
retro_hsap_3888, retro_hsap_3894,
Gorilla gorilla ENSGGOG00000001579 ortholog_one2one 3 retrogenes
retro_ggor_2540, retro_ggor_2615, retro_ggor_2623,
Loxodonta africana ENSLAFG00000017026 ortholog_one2one 1 retrogene
retro_lafr_1073,
Macaca mulatta ENSMMUG00000006119 ortholog_one2one 2 retrogenes
retro_mmul_1730, retro_mmul_1733,
Mus musculus ENSMUSG00000028798 ortholog_one2one 2 retrogenes
retro_mmus_1375, retro_mmus_607,
Nomascus leucogenys ENSNLEG00000002426 ortholog_one2one 2 retrogenes
retro_nleu_1129, retro_nleu_1135,
Pongo abelii ENSPPYG00000001598 ortholog_one2one 2 retrogenes
retro_pabe_3169, retro_pabe_3175,
Rattus norvegicus ENSRNOG00000047185 ortholog_one2one 1 retrogene
retro_rnor_1548,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_822 64.21 56.75
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2. retro_mdom_1054 93.90 65.34
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Download FASTA sequences of all ENSMODG00000017481 retrocopies