Parental gene:

Eif3i, ENSRNOG00000047185

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit I [Source:MGI Symbol;Acc:MGI:1860763]
Organism:Rat (Rattus norvegicus)
Coordinates:5:151525929..151532743(-)


>ENSRNOG00000047185
AAGCCCATCCTGCTTCAGGGCCATGAGCGGTCCATCACGCAAATCAAGTACAACCGCGAAGGAGACCTCCTTTTCACTGT
GGCCAAAGACCCCATCGTCAATGTGTGGTATTCTGTCAATGGCGAGAGGCTAGGCACCTACATGGGCCACACTGGAGCTG
TGTGGTGTGTGGATGCTGACTGGGACACCAAGCATGTCCTTACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGACTGT
GAAACAGGTAAAAAGTGGCCAACGACAGTTTACCTGTCTAAGCAAAGACAGTGTACCTGTCTAAGCAAATATAATATGTT
CAGGAAAACTAGAGACAAGTTCATAGGTGGTGAATGTTTTATTAAGTTTATGGATGTTTTGTCTGTGTGTACATTAGCAT
ACCAGGAGATGGCTTTGCATCCCATAGGAAGTTACAGACAGCTGCGAGCTGCCATGTGGGTCCTGGGAATCGAGTGCAGG
ACCTCTGGAAGAGCAGCCAGCACTTTGAACTGCTACACCGTCTTTTCTGGAGAGGTATTGGTGAACGTTAAGGAACACTC
CCGGCAGATCAATGACATCCAGTTGTCTAGAGACATGACCATGTTTGTCACCGCATCCAAGGACAACACAGCTAAGCTCT
TCGACTCCACAAGTCTTGAACATCAGAAGACTTTCCGAACAGAACGTCCCGTCAACTCGGCTGCTCTCTCTCCCAACTAT
GACCATGTGGTGCTGGGAGGTGGTCAGGAAGCCATGGATGTGACCACAACCTCCACCAGGATTGGCAAGTTTGAGGCCAG
GTTCTTCCATTTGGCTTTTGAGGAAGAGTTTGGAAGAGTCAAGGGCCACTTTGGACCTATCAACAGTGTTGCCTTCCATC
CCGATGGCAAGAGCTACAGCAGCGGTGGCGAAGACGGCTATGTCCGCATCCACTACTTCGACCCTCAGTACTTCGAGTTC
GAGTTTGAGGCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 23 .58 RPM
SRP017611_kidney 33 .64 RPM
SRP017611_liver 15 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006810 possible_ortholog 1 retrogene
retro_cjac_3104,
Echinops telfairi ENSETEG00000008047 ortholog_one2one 1 retrogene
retro_etel_1497,
Loxodonta africana ENSLAFG00000017026 ortholog_one2one 1 retrogene
retro_lafr_1073,
Monodelphis domestica ENSMODG00000017481 ortholog_one2one 2 retrogenes
retro_mdom_1054, retro_mdom_822,
Mus musculus ENSMUSG00000028798 ortholog_one2one 2 retrogenes
retro_mmus_1375, retro_mmus_607,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1548 70.87 95.37
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000047185 retrocopies