Parental gene:

TUBB4B, ENSMODG00000017213

Aliases:None
Description:tubulin, beta 4B class IVb [Source:HGNC Symbol;Acc:20771]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:470408774..470411529(-)


>ENSMODG00000017213
ATGAGGGAGATCGTGCACCTCCAGGCCGGGCAATGCGGCAACCAGATCGGCGCAAAGTTCTGGGAGGTGATCAGTGACGA
ACATGGTATCGACCCCACCGGAACCTACCATGGGGACAGCGACCTGCAGCTGGAGAGGATTAATGTCTACTACAATGAAG
CAACCGGTGGGAAATACGTGCCCCGGGCAGTTCTGGTCGATCTTGAGCCTGGAACAATGGACTCTGTCCGGTCTGGACCT
TTCGGACAGATTTTCAGGCCAGACAACTTTGTCTTCGGCCAGAGTGGTGCTGGAAACAACTGGGCAAAAGGCCACTACAC
AGAAGGTGCGGAACTGGTTGACTCAGTATTAGATGTTGTAAGAAAAGAAGCGGAAAGTTGTGACTGTCTCCAGGGCTTCC
AGCTGACGCACTCTCTGGGTGGTGGGACTGGGTCTGGGATGGGTACCCTCTTAATCAGCAAGATCCGGGAAGAGTACCCA
GACAGAATCATGAACACTTTCAGCGTTGTACCCTCCCCCAAGGTATCGGACACTGTAGTAGAACCCTACAATGCAACCCT
CTCAGTACACCAGCTTGTAGAAAACACAGATGAAACCTATTGTATTGATAATGAAGCCCTCTACGATATCTGTTTTAGAA
CCCTGAAACTGACCACTCCCACATATGGTGATCTGAACCACCTGGTGTCAGCAACCATGAGTGGTGTCACCACCTGCTTA
CGTTTCCCAGGGCAGCTTAACGCTGACTTGCGTAAGCTGGCAGTGAACATGGTCCCCTTTCCCCGTCTGCACTTCTTTAT
GCCTGGCTTTGCTCCACTGACTAGCCGTGGTAGCCAGCAGTACCGTGCTTTAACTGTGCCAGAGCTCACCCAGCAGATGT
TTGATGCAAAGAACATGATGGCTGCTTGTGACCCTCGGCATGGGCGCTATCTTACAGTAGCAGCCGTGTTCAGAGGCCGT
ATGTCCATGAAGGAGGTAGATGAGCAAATGCTCAATGTTCAAAACAAGAACAGCAGTTACTTTGTTGAATGGATCCCCAA
CAATGTGAAAACAGCCGTTTGTGACATCCCACCCCGGGGCCTGAAAATGTCTGCCACCTTCATTGGTAACAGTACTGCCA
TCCAAGAGCTCTTTAAGCGCATTTCTGAGCAGTTTACAGCCATGTTTCGCAGAAAGGCTTTCTTACACTGGTATACTGGA
GAGGGCATGGATGAAATGGAATTCACTGAAGCAGAAAGCAACATGAATGATTTGGTTTCTGAGTATCAGCAGTATCAGGA
TGCCACAGCTGAGGAGGAGGGAGAATTTGAGGAGGAGGCTGAAGAGGAGGTGGCATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016380 possible_ortholog 2 retrogenes
retro_amel_817, retro_amel_868,
Cavia porcellus ENSCPOG00000011966 ortholog_one2one 1 retrogene
retro_cpor_497,
Microcebus murinus ENSMICG00000010939 ortholog_one2one 1 retrogene
retro_mmur_792,
Macaca mulatta ENSMMUG00000012164 ortholog_one2one 2 retrogenes
retro_mmul_1849, retro_mmul_2533,
Mus musculus ENSMUSG00000036752 ortholog_one2one 2 retrogenes
retro_mmus_158, retro_mmus_422,
Otolemur garnettii ENSOGAG00000005927 ortholog_one2one 2 retrogenes
retro_ogar_3410, retro_ogar_3450,
Pan troglodytes ENSPTRG00000023373 ortholog_one2one 2 retrogenes
retro_ptro_2403, retro_ptro_3166,
Rattus norvegicus ENSRNOG00000010170 ortholog_one2one 2 retrogenes
retro_rnor_742, retro_rnor_867,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_117 89.14 99.33
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Download FASTA sequences of all ENSMODG00000017213 retrocopies