Parental gene:

ENSMODG00000010398

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:333841800..333853020(-)


>ENSMODG00000010398
GGGAGCACCCCTGAAAAATGCTACCAGAAGCTGATTGAGTATTATAAGAATGGGGACCTGTCCTTCAAGTATGTGAAGAC
ATTTAACATGGACGAGTATGTGGGTCTCCCACGTGACCACTCTCAGAGCTACCATACCTTCATGTGGGAGAAATTATTCA
AGCACATTGACATTAGTCCTGAAAACACCCATATCCTGGATGGAAACGCAGCTGATCTGCAGGCAGAATGTGATGCTTTT
GAAGAAAAGATCAAGGAAGCTGGAGGGATCGAGCTCTTTGTTGGAGGTATTGGCCCTGATGGGCACGTCGCCTTCAATGA
GCCTGGCTCAAGTTTGGTGTCTAGGACCCGAGTGAAAACTCTGGCCATGGATACCATCCTAGCCAATGCCCGGTTCTTCG
ATGGAAAAAACTCCCAAGTTCCCACGATGGCTCTGACTGTGGGTGTGGGTACAGTCATGGATGCCAGAGAGGTCATGATC
TTAATTACAGGGGCCCATAAGGCATTTGCACTGCACAAAGCCATTGAGGAAGGGATAAATCACATGTGGACTGTGTCTGC
CTTCCAGCAGCACCCGCAAACAATATTCGTGTGTGATGAAGATGCCACACTGGAACTTAAAGTGAAAACTGTCAAATATT
TCAAAGGGTTGATGCTTGTTCATAACAAGCTAGTGGAACCACTGTACAGTATAAAAGAAACAGAAACAAAAACAGAGACA
AGCCACTCTACCAAGAAACCATATAGTGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 16 .09 RPM
SRP007412_cerebellum 15 .34 RPM
SRP007412_heart 17 .14 RPM
SRP007412_kidney 76 .38 RPM
SRP007412_liver 24 .17 RPM
SRP007412_testis 30 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007865 ortholog_one2many 1 retrogene
retro_btau_535,
Choloepus hoffmanni ENSCHOG00000009884 ortholog_many2many 2 retrogenes
retro_chof_2278, retro_chof_42,
Dasypus novemcinctus ENSDNOG00000007804 ortholog_one2many 3 retrogenes
retro_dnov_1363, retro_dnov_1608, retro_dnov_508,
Macropus eugenii ENSMEUG00000015442 ortholog_one2one 1 retrogene
retro_meug_655,
Monodelphis domestica ENSMODG00000020593 within_species_paralog 1 retrogene
retro_mdom_67,
Mus musculus ENSMUSG00000052102 ortholog_one2many 1 retrogene
retro_mmus_2711,
Oryctolagus cuniculus ENSOCUG00000016963 ortholog_one2many 1 retrogene
retro_ocun_1266,
Otolemur garnettii ENSOGAG00000007303 ortholog_one2many 3 retrogenes
retro_ogar_2251, retro_ogar_2506, retro_ogar_446,
Ictidomys tridecemlineatus ENSSTOG00000016508 ortholog_one2many 1 retrogene
retro_itri_1135,
Tupaia belangeri ENSTBEG00000003330 ortholog_one2many 2 retrogenes
retro_tbel_2431, retro_tbel_59,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1337 79.03 98.40
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Download FASTA sequences of all ENSMODG00000010398 retrocopies