Parental gene:

MMU.1135, ENSMMUG00000022585

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:17:19853053..19870243(+)


>ENSMMUG00000022585
ATGAAGTCCAATCCGGCTATCCAGGCTGCTATTGACCTCACGGCGGGGGCTGCAGGGGGCACAGCGTGTGTACTGACCGG
GCAGCCCTTTGACACGATGAAAGTGAAGATGCAGACGTTCCCTGACCTGTACCGGGGCCTCACGGACTGCTGCCTGAAGA
CTTACTCCCAGGTGGGCTTCCGTGGCTTCTACAAAGGGACCAGCCCAGCACTAATCGCCAACATCGCTGAGAACTCAGTC
CTGTTCATGTGCTATGGCTTCTGCCAGCAGGTGGTGCGGAAAGTGGCTGGACTGGACAAGCAGGCAAAGCTGAGTGATCT
GCAGAATGCAGCTGCCGGTTCCTTCGCCTCTGCCTTTGCTGCACTGGTGCTCTGCCCCACGGAGCTCGTGAAGTGCCGGC
TGCAGACCATGTATGAGATGGAGACATCAGGAAAGATAGCCAAAAGCCAGAATACAGTGTGGTCTGTCATCAAAAGTATC
CTTAGGAAGGATGGCCCCTTGGGCTTCTACCATGGACTCTCAAGCACTTTACTTCGAGAAGTACCGGGCTATTTCTTCTT
CTTTGGTGGCTATGAACTGAGCCGGTCCTTTTTTGCATCAGGGAGATCAAAAGATGAACTAGGCCCTGTCCCTTTGATGT
TAAGTGGTGGAGTTGGTGGGATTTGCCTCTGGCTTGCGGTATACCCAGTGGATTGTATCAAATCCAGAATTCAAGTTCTT
TCCATGTCTGGAAAACAGGCAGGATTTATGAGAACCTTTATAAATGTTGTGAAAAATGAAGGAATAACGGCCTTATATTC
TGGACTGAAACCTACTATGATTCGAGCATTCCCTGCCAATGGAGCACTCTTTTTGGCCTACGAATATAGCAGGAAGTTGA
TGATGAACCAGTTGGAAGCATACTGA

Library Parental gene expression (RPM)
SRP007412_brain 2 .58 RPM
SRP007412_brain_prefrontal_cortex 1 .82 RPM
SRP007412_cerebellum 3 .36 RPM
SRP007412_heart 1 .53 RPM
SRP007412_kidney 2 .46 RPM
SRP007412_liver 51 .62 RPM
SRP007412_testis 4 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017797 ortholog_one2many 1 retrogene
retro_cjac_1776,
Cavia porcellus ENSCPOG00000005570 ortholog_one2many 2 retrogenes
retro_cpor_105, retro_cpor_107,
Equus caballus ENSECAG00000007666 possible_ortholog 1 retrogene
retro_ecab_72,
Homo sapiens ENSG00000102743 ortholog_one2one 1 retrogene
retro_hsap_44,
Gorilla gorilla ENSGGOG00000025261 ortholog_one2one 1 retrogene
retro_ggor_2294,
Microcebus murinus ENSMICG00000007218 ortholog_one2one 1 retrogene
retro_mmur_18,
Nomascus leucogenys ENSNLEG00000001185 ortholog_one2one 1 retrogene
retro_nleu_1704,
Otolemur garnettii ENSOGAG00000009380 ortholog_one2one 1 retrogene
retro_ogar_490,
Pongo abelii ENSPPYG00000005307 ortholog_one2one 1 retrogene
retro_pabe_82,
Pan troglodytes ENSPTRG00000005809 ortholog_one2one 1 retrogene
retro_ptro_2303,
Pteropus vampyrus ENSPVAG00000010393 possible_ortholog 1 retrogene
retro_pvam_15,
Ictidomys tridecemlineatus ENSSTOG00000007840 ortholog_one2one 1 retrogene
retro_itri_726,
Tupaia belangeri ENSTBEG00000017239 ortholog_one2one 1 retrogene
retro_tbel_4583,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_199 86.38 100.00
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Download FASTA sequences of all ENSMMUG00000022585 retrocopies