Parental gene:

USP12, ENSMMUG00000021425

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:17:6827191..6877076(-)


>ENSMMUG00000021425
GGCGCCAATGCTTCGGCATTAGAGAAAGAGATTGGTCCAGAACAGTTTCCAGTCAATGAGCACTATTTTGGATTAGTCAA
CTTTGGGAATACCTGCTACTGCAATTCAGTTCTTCAAGCACTTTATTTTTGTCGTCCATTTCGGGAAAAAGTTCTTGCAT
ATAAGAGTCAACCTAGGAAAAAGGAGAGCCTTCTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACGCAGAAGAAA
AAGGTTGGAGTAATACCCCCTAAGAAGTTCATCACAAGATTACGGAAAGAAAATGAGCTTTTTGACAACTACATGCAACA
AGATGCCCATGAATTCTTAAATTACCTGCTAAATACAATTGCTGATATTTTACAAGAAGAGAGAAAGCAGGAAAAACAAA
ATGGTCGCTTACCTAATGGTAATATTGACAATGAAAATAATAACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTT
CAGGGAACATTAACTAATGAAACCAGATGTCTTACTTGTGAAACTATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTC
TGTTGACGTGGAACAAAATACATCAATTACTCACTGCTTAAGGGGTTTCAGCAACACAGAAACTCTATGCAGTGAATACA
AGTATTACTGTGAAGAGTGTCGCAGCAAACAGGAAGCACACAAACGGATGAAAGTTAAAAAACTGCCCATGATTCTAGCT
CTACACCTGAAGAGATTTAAATATATGGATCAACTTCATCGATATACAAAACTCTCTTACCGGGTAGTTTTCCCTTTAGA
ACTTCGTCTATTTAACACTTCAGGTGATGCCACCAATCCAGACAGAATGTACGACCTGGTTGCTGTTGTGGTTCACTGTG
GAAGTGGTCCCAATCGAGGCCATTATATTGCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTTGATGACGACATTGTA
GAAAAAATAGATGCACAGGCTATTGAAGAATTCTACGGGTTGACATCAGATATCTCAAAGAACTCTGAGTCTGGTTACAT
CCTTTTCTATCAGTCTCGGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 81 .12 RPM
SRP007412_brain_prefrontal_cortex 55 .13 RPM
SRP007412_cerebellum 53 .47 RPM
SRP007412_heart 17 .67 RPM
SRP007412_kidney 31 .69 RPM
SRP007412_liver 18 .53 RPM
SRP007412_testis 16 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019344 possible_ortholog 5 retrogenes
retro_cjac_2734, retro_cjac_3901, retro_cjac_3964, retro_cjac_3965, retro_cjac_4011,
Homo sapiens ENSG00000152484 possible_ortholog 4 retrogenes
retro_hsap_2328, retro_hsap_3266, retro_hsap_4726, retro_hsap_4918,
Microcebus murinus ENSMICG00000006269 ortholog_one2many 2 retrogenes
retro_mmur_1167, retro_mmur_1187,
Nomascus leucogenys ENSNLEG00000000323 possible_ortholog 3 retrogenes
retro_nleu_1817, retro_nleu_1995, retro_nleu_2426,
Otolemur garnettii ENSOGAG00000030639 ortholog_one2many 1 retrogene
retro_ogar_2897,
Pongo abelii ENSPPYG00000005232 possible_ortholog 3 retrogenes
retro_pabe_2110, retro_pabe_2705, retro_pabe_3672,
Pan troglodytes ENSPTRG00000005727 possible_ortholog 3 retrogenes
retro_ptro_1701, retro_ptro_2209, retro_ptro_3143,
Tupaia belangeri ENSTBEG00000012960 ortholog_one2many 2 retrogenes
retro_tbel_3285, retro_tbel_4692,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_937 71.57 83.05
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Download FASTA sequences of all ENSMMUG00000021425 retrocopies