Parental gene:

USP12, ENSMICG00000006269

Aliases:None
Description:ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:20485]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_2657:18328..118848(-)


>ENSMICG00000006269
GGCGCCAATGCTTCGGCATTAGAGAAAGAGATTGGTCCAGAACAGTTTCCAGTCAATGAGCACTATTTTGGATTAGTCAA
TTTTGGGAATACCTGCTACTGCAATTCAGTTCTTCAAGCACTTTATTTTTGTCGTCCGTTTCGGGAAAAAGTTCTAGCCT
ACAAGAGTCAACCTAGGAAGAAGGAGAACCTTCTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACTCAGAAGAAA
AAGGTTGGAGTAATACCTCCTAAGAAGTTCATAACAAGGTTACGGAAAGAAAATGAGCTTTTTGACAACTACATGCAACA
AGATGCCCATGAATTCTTAAATTACCTGCTAAATACAATTGCTGATATTTTACAAGAAGAGAGAAAGCAGGAAAAACAAA
ATGGTCGCTTACCTAATGGTAATATTGATAGTGAAAATAACAACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTT
CAGGGAACATTAACTAATGAAACCAGATGTCTTACTTGTGAAACTATAAGCAGCAAAGATGAAGATTTTTTAGATCTTTC
TGTTGACGAACAAAACACATCAATTACTCACTGCTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTGGTCCCAATCGAGGCCATTATATTGCAATAGTTAAGAGTCATGATTTTTGGTTGTTGTTCGATGACGACATTGTAGAA
AAAATAGATGCACAAGCTATTGAAGAATTCTACGGGTTGACATCAGACATCTCAAAGAACTCTGAGTCTGGTTACATCCT
TTTCTACCAGTCTCGGGACTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019344 ortholog_one2one 5 retrogenes
retro_cjac_2734, retro_cjac_3901, retro_cjac_3964, retro_cjac_3965, retro_cjac_4011,
Homo sapiens ENSG00000152484 ortholog_one2one 4 retrogenes
retro_hsap_2328, retro_hsap_3266, retro_hsap_4726, retro_hsap_4918,
Macaca mulatta ENSMMUG00000021425 ortholog_one2many 1 retrogene
retro_mmul_937,
Nomascus leucogenys ENSNLEG00000000323 ortholog_one2many 3 retrogenes
retro_nleu_1817, retro_nleu_1995, retro_nleu_2426,
Otolemur garnettii ENSOGAG00000030639 ortholog_one2one 1 retrogene
retro_ogar_2897,
Pongo abelii ENSPPYG00000005232 ortholog_one2one 3 retrogenes
retro_pabe_2110, retro_pabe_2705, retro_pabe_3672,
Pan troglodytes ENSPTRG00000005727 ortholog_one2one 3 retrogenes
retro_ptro_1701, retro_ptro_2209, retro_ptro_3143,
Tupaia belangeri ENSTBEG00000012960 ortholog_one2one 2 retrogenes
retro_tbel_3285, retro_tbel_4692,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_1167 97.97 55.52
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2. retro_mmur_1187 98.50 56.37
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Download FASTA sequences of all ENSMICG00000006269 retrocopies