Parental gene:

MMU.4064, ENSMMUG00000018854

Aliases:None
Description:ras-related C3 botulinum toxin substrate 2 [Source:RefSeq peptide;Acc:NP_001248306]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:10:81125158..81143690(-)


>ENSMMUG00000018854
ATGCAGGCCATCAAGTGTGTGGTGGTGGGAGATGGGGCCGTGGGCAAGACCTGCCTTCTCATCAGCTACACCACCAACGC
CTTCCCCGGAGAGTACATCCCCACCGTGTTTGACAACTATTCAGCCAATGTGATGGTGGACAGCAAGCCGGTGAACCTGG
GGCTGTGGGACACTGCTGGGCAGGAGGACTACGACCGTCTCCGGCCACTCTCCTACCCACAGACGGACGTCTTCCTCATC
TGCTTCTCCCTCGTCAGCCCAGCCTCCTATGAGAACGTCCGTGCCAAGTGGTTCCCGGAAGTGCGGCACCACTGCCCCAG
CACACCCATCATCCTGGTGGGCACCAAGCTGGACCTGCGGGACGACAAGGACACCATCGAGAAACTGAAGGAGAAGAAGC
TGGCTCCCATCACCTACCCGCAGGGCCTGGCACTGGCCAAGGAGATTGACTCGGTGAAATATCTGGAGTGCTCAGCCCTC
ACCCAGAGAGGCCTGAAAACCGTGTTCGACGAAGCCATCCGGGCCGTGCTGTGCCCTCAGCCCACGCGGCAGCAGAAGCG
CGCCTGCAGCCTCCTCTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .67 RPM
SRP007412_brain_prefrontal_cortex 0 .24 RPM
SRP007412_cerebellum 0 .45 RPM
SRP007412_heart 3 .42 RPM
SRP007412_kidney 5 .75 RPM
SRP007412_liver 11 .68 RPM
SRP007412_testis 0 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009889 ortholog_one2one 2 retrogenes
retro_amel_1691, retro_amel_647,
Callithrix jacchus ENSCJAG00000002144 ortholog_one2one 4 retrogenes
retro_cjac_1158, retro_cjac_1954, retro_cjac_2917, retro_cjac_847,
Equus caballus ENSECAG00000022570 ortholog_one2one 2 retrogenes
retro_ecab_619, retro_ecab_705,
Erinaceus europaeus ENSEEUG00000009509 ortholog_one2one 1 retrogene
retro_eeur_20,
Felis catus ENSFCAG00000025776 ortholog_one2one 2 retrogenes
retro_fcat_1064, retro_fcat_826,
Gorilla gorilla ENSGGOG00000010612 ortholog_one2one 2 retrogenes
retro_ggor_1403, retro_ggor_188,
Loxodonta africana ENSLAFG00000013012 ortholog_one2one 1 retrogene
retro_lafr_117,
Macropus eugenii ENSMEUG00000012295 ortholog_one2one 2 retrogenes
retro_meug_252, retro_meug_552,
Microcebus murinus ENSMICG00000017775 ortholog_one2one 4 retrogenes
retro_mmur_1104, retro_mmur_1557, retro_mmur_20, retro_mmur_600,
Myotis lucifugus ENSMLUG00000012668 ortholog_one2one 2 retrogenes
retro_mluc_326, retro_mluc_860,
Macaca mulatta ENSMMUG00000021075 within_species_paralog 4 retrogenes
retro_mmul_1310, retro_mmul_1964, retro_mmul_2642, retro_mmul_721,
Macaca mulatta ENSMMUG00000022009 other_paralog 8 retrogenes
retro_mmul_1449, retro_mmul_1612, retro_mmul_1685, retro_mmul_1900, retro_mmul_1932, retro_mmul_24, retro_mmul_349, retro_mmul_598,
Mustela putorius furo ENSMPUG00000012682 ortholog_one2one 2 retrogenes
retro_mputfur_872, retro_mputfur_911,
Nomascus leucogenys ENSNLEG00000014759 ortholog_one2one 7 retrogenes
retro_nleu_1215, retro_nleu_1330, retro_nleu_2094, retro_nleu_2355, retro_nleu_689, retro_nleu_724, retro_nleu_87,
Oryctolagus cuniculus ENSOCUG00000016115 ortholog_one2one 1 retrogene
retro_ocun_43,
Otolemur garnettii ENSOGAG00000004138 ortholog_one2one 1 retrogene
retro_ogar_2977,
Pongo abelii ENSPPYG00000011791 ortholog_one2one 3 retrogenes
retro_pabe_1591, retro_pabe_21, retro_pabe_3818,
Pteropus vampyrus ENSPVAG00000002281 ortholog_one2one 2 retrogenes
retro_pvam_21, retro_pvam_609,
Sarcophilus harrisii ENSSHAG00000014852 ortholog_one2one 1 retrogene
retro_shar_763,
Sus scrofa ENSSSCG00000021944 ortholog_one2one 4 retrogenes
retro_sscr_40, retro_sscr_565, retro_sscr_582, retro_sscr_882,
Ictidomys tridecemlineatus ENSSTOG00000023766 ortholog_one2one 1 retrogene
retro_itri_510,
Tursiops truncatus ENSTTRG00000001099 ortholog_one2one 8 retrogenes
retro_ttru_1029, retro_ttru_1065, retro_ttru_1188, retro_ttru_1599, retro_ttru_1904, retro_ttru_318, retro_ttru_379, retro_ttru_825,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_210 71.35 100.00
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2. retro_mmul_1346 59.82 56.25
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Download FASTA sequences of all ENSMMUG00000018854 retrocopies