Parental gene:

RAC2, ENSSSCG00000021944

Aliases:None
Description:ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) [Source:HGNC Symbol;Acc:9802]
Organism:Pig (Sus scrofa)
Coordinates:5:8149171..8167615(+)


>ENSSSCG00000021944
ATGCAGGCCATCAAGTGTGTGGTGGTGGGAGATGGAGCCGTGGGCAAGACCTGCCTTCTCATCAGCTACACCACCAACGC
CTTCCCGGGAGAGTACATCCCCACTGTGTTTGACAACTATTCAGCCAATGTGATGGTGGACAGCAAGCCCGTGAACCTGG
GGCTGTGGGACACGGCGGGGCAGGAGGACTACGACCGCCTTCGGCCGCTCTCCTACCCGCAGACGGACGTCTTCCTCATC
TGCTTCTCTCTTGTCAGCCCAGCCTCCTATGAGAATGTACGAGCCAAGTGGTTCCCCGAGGTGCGGCATCATTGCCCCAG
CACGCCCATCATCCTGGTGGGCACCAAGCTGGACCTGCGGGATGACAAGGACACCATCGAGAAGCTGAAGGAGAAGAAGC
TCGCGCCTATTACCTACCCACAGGGCCTGGCGCTGGCCAAGGAGATCGACTCGGTGAAATACCTGGAGTGCTCGGCCCTT
ACCCAGCGAGGCCTGAAAACCGTCTTTGACGAAGCGATCCGGGCCGTCCTGTGCCCCCAGCCCACGCGGCCGCAGAAACG
CCCCTGCAGCATCCTCTAG

Library Parental gene expression (RPM)
SRP014902_placenta 1 .33 RPM
SRP014902_testis 17 .54 RPM
SRP018288_heart 6 .31 RPM
SRP018288_kidney 10 .64 RPM
SRP018288_liver 11 .03 RPM
SRP018288_lung 156 .61 RPM
SRP018856_adipose 17 .25 RPM
SRP035408_brain 1 .30 RPM
SRP035408_liver 4 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009889 ortholog_one2one 2 retrogenes
retro_amel_1691, retro_amel_647,
Callithrix jacchus ENSCJAG00000002144 ortholog_one2one 4 retrogenes
retro_cjac_1158, retro_cjac_1954, retro_cjac_2917, retro_cjac_847,
Equus caballus ENSECAG00000022570 ortholog_one2one 2 retrogenes
retro_ecab_619, retro_ecab_705,
Erinaceus europaeus ENSEEUG00000009509 ortholog_one2one 1 retrogene
retro_eeur_20,
Felis catus ENSFCAG00000025776 ortholog_one2one 2 retrogenes
retro_fcat_1064, retro_fcat_826,
Gorilla gorilla ENSGGOG00000010612 ortholog_one2one 2 retrogenes
retro_ggor_1403, retro_ggor_188,
Loxodonta africana ENSLAFG00000013012 ortholog_one2one 1 retrogene
retro_lafr_117,
Macropus eugenii ENSMEUG00000012295 ortholog_one2one 2 retrogenes
retro_meug_252, retro_meug_552,
Microcebus murinus ENSMICG00000017775 ortholog_one2one 4 retrogenes
retro_mmur_1104, retro_mmur_1557, retro_mmur_20, retro_mmur_600,
Myotis lucifugus ENSMLUG00000012668 ortholog_one2one 2 retrogenes
retro_mluc_326, retro_mluc_860,
Macaca mulatta ENSMMUG00000018854 ortholog_one2one 2 retrogenes
retro_mmul_1346, retro_mmul_210,
Mustela putorius furo ENSMPUG00000012682 ortholog_one2one 2 retrogenes
retro_mputfur_872, retro_mputfur_911,
Nomascus leucogenys ENSNLEG00000014759 ortholog_one2one 7 retrogenes
retro_nleu_1215, retro_nleu_1330, retro_nleu_2094, retro_nleu_2355, retro_nleu_689, retro_nleu_724, retro_nleu_87,
Oryctolagus cuniculus ENSOCUG00000016115 ortholog_one2one 1 retrogene
retro_ocun_43,
Otolemur garnettii ENSOGAG00000004138 ortholog_one2one 1 retrogene
retro_ogar_2977,
Pongo abelii ENSPPYG00000011791 ortholog_one2one 3 retrogenes
retro_pabe_1591, retro_pabe_21, retro_pabe_3818,
Pteropus vampyrus ENSPVAG00000002281 ortholog_one2one 2 retrogenes
retro_pvam_21, retro_pvam_609,
Sarcophilus harrisii ENSSHAG00000014852 ortholog_one2one 1 retrogene
retro_shar_763,
Sus scrofa ENSSSCG00000003520 other_paralog 1 retrogene
retro_sscr_899,
Sus scrofa ENSSSCG00000008439 other_paralog 1 retrogene
retro_sscr_102,
Ictidomys tridecemlineatus ENSSTOG00000023766 ortholog_one2one 1 retrogene
retro_itri_510,
Tursiops truncatus ENSTTRG00000001099 ortholog_one2one 8 retrogenes
retro_ttru_1029, retro_ttru_1065, retro_ttru_1188, retro_ttru_1599, retro_ttru_1904, retro_ttru_318, retro_ttru_379, retro_ttru_825,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_40 67.19 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_565 64.95 98.44
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_sscr_582 64.95 98.44
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_sscr_882 53.27 54.69
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000021944 retrocopies