Parental gene:

C19orf40, ENSMMUG00000017939

Aliases:None
Description:chromosome 19 open reading frame 40 [Source:HGNC Symbol;Acc:28467]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:19:39484666..39486026(+)


>ENSMMUG00000017939
ATGGAAAAGAAACCCCCGGATGATACGGGCCCCGTGCACGTGCCTTTGGGGCATATTGTGGCCAATGAGAAATGGCGCGG
GTCACAGCTGGCGCAGGAGATGCAAGGGAAAATTAAGCTCATTTTCGAGGATGGCTTGACACCAGACTTTTATCTGTCGA
ACAGATGCTGCGTTCTTTATGTCACCGAAGCTGATTTGGTGGCAGGAAATGGCTACAGAAAGAGGCTTGTTCGGGTTAGA
AATTCTGGTAATCTTCAAGGAATTGTAGTCGTTGAAAAAACCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT
TACTGTGCTGGACCTTGGAATGGTGCTGCTTCCAGTGGCCAGCCAGATGGAAGCATCCTGCCTCGTTATCCAGTTGGTG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_brain_prefrontal_cortex 0 .08 RPM
SRP007412_cerebellum 0 .32 RPM
SRP007412_heart 0 .18 RPM
SRP007412_kidney 0 .12 RPM
SRP007412_liver 0 .16 RPM
SRP007412_testis 1 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000728 ortholog_one2one 2 retrogenes
retro_cjac_1011, retro_cjac_3952,
Cavia porcellus ENSCPOG00000011965 ortholog_one2one 1 retrogene
retro_cpor_1536,
Dasypus novemcinctus ENSDNOG00000014134 ortholog_one2one 4 retrogenes
retro_dnov_1817, retro_dnov_2382, retro_dnov_426, retro_dnov_942,
Echinops telfairi ENSETEG00000002716 ortholog_one2one 1 retrogene
retro_etel_458,
Loxodonta africana ENSLAFG00000006401 ortholog_one2one 4 retrogenes
retro_lafr_165, retro_lafr_365, retro_lafr_415, retro_lafr_789,
Myotis lucifugus ENSMLUG00000013287 ortholog_one2one 1 retrogene
retro_mluc_522,
Procavia capensis ENSPCAG00000009727 ortholog_one2one 1 retrogene
retro_pcap_444,
Sarcophilus harrisii ENSSHAG00000016372 ortholog_one2one 1 retrogene
retro_shar_299,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_788 73.20 72.18
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Download FASTA sequences of all ENSMMUG00000017939 retrocopies